Figure 1.
a) Bar plots from CLUMPP results aligning 10 structure runs for K = 2 to K = 10. Each plot was created using 960 tagSNPs from 864 individuals, and is sorted by q values. The plots are read from left to right, with bars representing individuals and the color of the bar representing the proportion of that individuals' markers that originated from a certain population. b) Probabilities from structure shown as boxplots of the 10 runs at each K. Structure admixture (c) and FST (d) values for 10 runs. The FST's graphed are averages across each subpopulation for each K.
Table 1.
Ancestry analysis results for between 2 and 7 populations assumed.
Figure 2.
Census data for New Hampshire from 1870 to 1930 showing thousands of immigrants from European countries by census year.
Figure 3.
D' values using 18 SNPs from the GHR gene for K = 4 population clusters.
Table 2.
Haplotype association analysis results using score statistics as computed within the R package haplo.stats.