On taming the effect of transcript level intra-condition count variation during differential expression analysis: A story of dogs, foxes and wolves
Fig 6
Distribution of dispersion estimates.
Plots of final dispersion estimates for both case studies, a) wolves and dogs; b) tame and aggressive foxes, calculated using DESeq2 for the non-filtered (NF; orange) and 10% filtered datasets (90th; blue). Each black dot represents a single transcript, and red dots represent outliers. The number of outliers and correlation index (r2) are displayed in the top right corner of each panel. Both x and y-axis are transformed into a logarithm scale. The line in each graph corresponds to the regression analysis between the mean of normalized counts and dispersion estimates.