On taming the effect of transcript level intra-condition count variation during differential expression analysis: A story of dogs, foxes and wolves
Fig 1
Diagramatic overview of how reference based transcripts are removed by TVscript.
Steps (i) to (viii) indicate actions taken. Reference transcripts (green circles) are showen for diagramtic purposes in order to highlight how read counts (grey circles) across replicates are treated for each transcript independently. Read counts are grouped into individual files (gray rectangles) in accordance to replicate. These files are grouped into one of two conditions (blue and brown boxes). Remaining keys are indicated at the bottom.