Immune diversity sheds light on missing variation in worldwide genetic diversity panels
Fig 2
The HLA diversity in the 1000 Genomes Project panel only represents 78% of the expected diversity for the alleles with a frequency >1%.
The top part of the figure shows the % match (Y axis) between the expected HLA diversity at different frequency cutoffs (X axis) and the HLA diversity observed in the 1,000 Genomes Project panel. For each frequency cutoff, the number of expected alleles is displayed at the top of each histogram. The bottom part of the figure displays the same information on a locus by locus basis for the 1% cutoff.