The gill-associated microbiome is the main source of wood plant polysaccharide hydrolases and secondary metabolite gene clusters in the mangrove shipworm Neoteredo reynei
Fig 2
Phylogeny of two high quality Teredinibacter bins based on a concatenated alignment of 43 proteins.
RAxML maximum likelihood tree based on the CAT model of rate heterogeneity and LG amino acid substitution matrix, with 100 rapid bootstraps. To improve readability, bootstraps for the Teredinibacter turnerae sub-clades I and II (with bootstrap values of 87 and 97 respectively) are omitted. The tree is rooted in between the Cellvibrionaceae branch and representatives of Halieaceae, Porticoccaceae, and Spongiibacteraceae. Color-coding of the families is similar to the one used by Spring and co-authors (2015). The scale bar represents 0.05 nucleotide substitutions per site.