Domestication Syndrome Is Investigated by Proteomic Analysis between Cultivated Cassava (Manihot esculenta Crantz) and Its Wild Relatives
Fig 10
Biological networks generated from a combination of 19 differential proteins involved with photosynthesis (a) in cassava leaves and 11 differential proteins related with starch accumulation (b) in storage roots.
Nineteen differentially up-(a red and upward arrow) and down-(a blue and downward arrow) regulated proteins including ribulose-bisphosphate carboxylase, phosphoribulokinase, ribulose- phosphate-3-epimerase, ribose-5-phosphate isomerase, RCA, transketolase, ATP synthase subunit beta, phosphoglycerate kinase, malate dehydrogenase, alcohol dehydrogenase and enoyl-ACP reductase, ethylene receptor, peroxiredoxin, heat shock protein, glucokinase, glutaredoxin, superoxide dismutase, beta-glucosidase and APX2 in cassava cultivars were used to generate a protein-protein interaction network about photosynthesis through Pathway Studio analysis. Eleven differentially up-(a red and upward arrow) and down-(a blue and downward arrow) regulated proteins including succinate dehydrogenase, dihydrolipoyllysine-residue succinyltransferase, UDP- glucosyltrans-ferase, transaldolase, uroporphyrinogen decarboxylase, pectinesterase, triosephosphate isomerase, N-acetyltransferase, aldo-keto reductase, annexin and pyruvate dehydrogenase in cassava cultivars were used to generate a protein-protein interaction network regarding starch accumulation through Pathway Studio analysis. Regulation is marked as an arrow with R, Chemical Reaction as an arrow with C, MolTransport as an arrow with M, Expression as an arrow with E and Binding as an arrow without any marks. The entity table and relation table were presented in S1 and S2 Tables.