Reduced Levels of Proteasome Products in a Mouse Striatal Cell Model of Huntington’s Disease
Fig 5
Heat map analysis of selected peptides.
Peptides frequently observed in multiple experiments were selected for this analysis. Each row denotes a specific peptide, each column represents a different experiment and each sub-column indicates peptide levels in the biological replicates within that experiment. Ratios of peptides found in multiple charged states and with different tag numbers were averaged together. The ratio was color-coded using the scheme shown at the bottom of the figure, with green representing decreases and red representing increases. Grey represents peptides that did not change substantially. White corresponds to peptides that were either not detected or which could not be accurately quantified due to peak overlap with another co-eluting peptide. Names of proteins, peptide sequences, and peptide ratios are included in S2 Table.