Ancestral Alleles in the Human Genome Based on Population Sequencing Data
Fig 5
Summary of derived alleles from QTL and GWAS variants: A. Types of nucleotide substitutions; B. Deletion-to-insertion ratios of QTL variants; C. GC proportions in insertions and deletions of QTL variants (original: whole genome data; EUR exon: EUR exon-expression QTL data; YRI exon: YRI exon-expression QTL data; EUR gene: EUR gene-expression QTL data; EUR repeats: EUR transcribed repeats QTL data; EUR trratio: EUR transcription ratio QTL data; GWAS: GWAS catalog data).