Ancestral Alleles in the Human Genome Based on Population Sequencing Data
Fig 2
Histograms of derived alleles based on various methods of ancestral allele identification (original data: allele frequency distribution from the sequencing data of the 1000 Genomes Project; sequence-alignment: derived allele frequency distribution by sequence-alignment; θ1: the derived allele frequency distribution by θ1 estimates; θ2: the derived allele frequency distribution by θ2 estimates; all: derived allele frequency distribution for the variants with all three methods concordant; any: derived allele frequency distribution for the variants with more than any two methods concordant).