Molecular Analysis of Colletotrichum Species in the Carposphere and Phyllosphere of Olive
Figure 2
Genotype networks based on ITS sequences of Colletotrichum acutatum sensu lato (A), C. gloeosporioides s.l. (B) and C. boninense s.l. (C), detected in different olive tissues in 3 different phenological phases (June, October and December).
According to the caption (bottom right of the figure) different colors were used to connect detected genotypes and analyzed olive samples. Empty white boxes in the caption indicate analyzed samples that did not produce any positive amplification, while white boxes containing “na” indicate non-analyzed samples. The letters “T1”, “T2” and “A1” inside the circles were used to indicate sampling fields where genotypes were detected (Cfr. Table 2). The size of each circle represents the relative frequency of genotypes in terms of number of samples in which they were detected. Genotypes were identified according to their phylogenetic collocation (Cfr. Fig. 1) and named using the initials of the corresponding species as follows: C. godetiae (Glo), C. acutatum s.s. (Acu), C. gloeosporioides s.s. (Glo), C. kahawae (Kah), C. acutatum s.l. (Acusl), C. gloesporioides s.l. (Glosl) and C. boninense s.l. (Bonsl).