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Gene Expression, Single Nucleotide Variant and Fusion Transcript Discovery in Archival Material from Breast Tumors

Figure 3

RNA-Seq Mapped Reads, Fusion and eSNV statistics By Protocol.

(A) % reads mapped to genome, genes and exon junctions, B) Venn diagram of fusion transcript detection, (C) Number SNV calls, (D) Correlation of FFPE library insert size with sensitivity for single nucleotide variant detection.

Figure 3

doi: https://doi.org/10.1371/journal.pone.0081925.g003