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Gene Expression, Single Nucleotide Variant and Fusion Transcript Discovery in Archival Material from Breast Tumors

Figure 2

Technical Replicates and Cross-Platform Correlations.

Log2 gene expression for FFPE technical replicate with (A) NanoString platform and (B) RiboZeroGold ScriptSeq; (C) Gene expression correlation of nine FFPE samples across nanoString and RiboZeroGold ScriptSeq protocols. Gene expression correlation of nine fresh-frozen (FROZ) RNA samples across (D) nanoString and ScriptSeq, (E) nanoString and TruSeq and (F) RiboZeroGold ScriptSeq and TruSeq.

Figure 2

doi: https://doi.org/10.1371/journal.pone.0081925.g002