Inferring Hierarchical Orthologous Groups from Orthologous Gene Pairs
Figure 5
Validation on empirical data: precision-recall plot of our newly proposed GETHOGs, COCO-CL, LOFT, EggNOG and OrthoDB on orthologous and paralogous gene relationships for the 3 gene families (3,783 relationships in total) analysed in Boeckmann et al.
[9]. Predictions for GETHOGs and COCO-CL are computed using the default parameters (respectively and bootstrap
). The points for EggNOG and OrthoDB are from the original analysis (Reference [9],table 2).