A public generalizable AI tool for automated segmentation of coronal brain tissue slabs for 3D neuropathology

• Jonathan Williams Ramirez ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: jwilliamsramirez@mgh.harvard.edu

  Affiliation Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

  https://orcid.org/0009-0008-8645-5773

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• Dina Zemlyanker,

  Roles Data curation, Formal analysis, Investigation, Methodology, Validation, Writing – original draft

  Affiliation Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Lucas Deden-Binder,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation

  Affiliation Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Rogeny Herisse,

  Roles Data curation

  Affiliation Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Erendira Garcia Pallares,

  Roles Data curation, Investigation

  Affiliation Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Karthik Gopinath,

  Roles Supervision, Writing – review & editing

  Affiliation Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Harshvardhan Gazula,

  Roles Conceptualization, Supervision

  Affiliation Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Christopher Mount,

  Roles Data curation, Investigation

  Affiliation Massachusetts Alzheimer’s Disease Research Center, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Liana N. Kozanno,

  Roles Data curation, Investigation

  Affiliation Massachusetts Alzheimer’s Disease Research Center, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Michael S. Marshall,

  Roles Data curation, Investigation

  Affiliation Massachusetts Alzheimer’s Disease Research Center, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Theresa R. Connors,

  Roles Data curation, Investigation

  Affiliation Massachusetts Alzheimer’s Disease Research Center, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Matthew P. Frosch,

  Roles Funding acquisition, Resources

  Affiliation Massachusetts Alzheimer’s Disease Research Center, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

  https://orcid.org/0000-0002-3940-9861

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• Mark Montine,

  Roles Data curation, Resources

  Affiliation Department of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, Washington, United States of America

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• Derek H. Oakley,

  Roles Funding acquisition, Resources, Supervision

  Affiliation Massachusetts Alzheimer’s Disease Research Center, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Christine L. Mac Donald,

  Roles Funding acquisition, Resources

  Affiliation Department of Neurological Surgery, University of Washington School of Medicine, Seattle, Washington, United States of America

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• C. Dirk Keene,

  Roles Funding acquisition, Resources

  Affiliation Department of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, Washington, United States of America

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• Bradley T. Hyman,

  Roles Funding acquisition, Resources, Supervision

  Affiliation Massachusetts Alzheimer’s Disease Research Center, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Bruce Fischl,

  Roles Funding acquisition, Supervision, Writing – review & editing

  Affiliation Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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•  [ ... ],
• Juan E. Iglesias

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America, Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Boston, Massachusetts, United States of America, Hawkes Institute, University College London, London, United Kingdom

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