Dominance of Zygosaccharomyces and shifts in bacterial pathways: Effects of antimicrobials on composition and diversity of the Ceratitis capitata bacterial and fungal microbiome

• Maria Cecilia Rasuk ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  ¶☯These two authors contributed equally to this work.

  Affiliation Citrus Biocontrol Lab, Pilot Plant for Microbiological Industrial Processes (PROIMI), National Scientific and Technical Research Council (CONICET), San Miguel de Tucumán, Tucumán, Argentina

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• Alfonsina Palladini ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  ¶☯These two authors contributed equally to this work.

  Affiliation Eco-ethological Research Laboratory of Fruit Flies and their Natural Enemies, Biological Pest Control Division, PROIMI-CONICET, Tucumán, Argentina

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• Andrea Moyano,

  Roles Conceptualization, Validation, Writing – review & editing

  Affiliation Eco-ethological Research Laboratory of Fruit Flies and their Natural Enemies, Biological Pest Control Division, PROIMI-CONICET, Tucumán, Argentina

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• Viviana Díaz,

  Roles Conceptualization, Validation, Writing – review & editing

  Affiliation Eco-ethological Research Laboratory of Fruit Flies and their Natural Enemies, Biological Pest Control Division, PROIMI-CONICET, Tucumán, Argentina

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• Antonella Giudice,

  Roles Conceptualization, Validation, Writing – review & editing

  Affiliation Eco-ethological Research Laboratory of Fruit Flies and their Natural Enemies, Biological Pest Control Division, PROIMI-CONICET, Tucumán, Argentina

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• Gisela Castillo,

  Roles Conceptualization, Validation, Writing – review & editing

  Affiliation Eco-ethological Research Laboratory of Fruit Flies and their Natural Enemies, Biological Pest Control Division, PROIMI-CONICET, Tucumán, Argentina

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• Solana Abraham,

  Roles Conceptualization, Funding acquisition, Project administration, Supervision, Writing – original draft, Writing – review & editing

  Affiliation Eco-ethological Research Laboratory of Fruit Flies and their Natural Enemies, Biological Pest Control Division, PROIMI-CONICET, Tucumán, Argentina

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• Juan Rull,

  Roles Conceptualization, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

  Affiliation Eco-ethological Research Laboratory of Fruit Flies and their Natural Enemies, Biological Pest Control Division, PROIMI-CONICET, Tucumán, Argentina

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• Anja Poehlein,

  Roles Conceptualization, Data curation, Formal analysis, Methodology, Writing – review & editing

  Affiliation Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Göttingen, Germany

  https://orcid.org/0000-0002-2473-6202

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• Rolf Daniel ,

  Roles Conceptualization, Funding acquisition, Project administration, Supervision, Validation, Writing – review & editing

  * E-mail: rdaniel@gwdg.de (RD); jdib@conicet.gov.ar (JRD)

  Affiliation Genomic and Applied Microbiology & Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August University of Göttingen, Göttingen, Germany

  https://orcid.org/0000-0002-8646-7925

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• Julian Rafael Dib

  Roles Conceptualization, Funding acquisition, Project administration, Resources, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: rdaniel@gwdg.de (RD); jdib@conicet.gov.ar (JRD)

  Affiliations Citrus Biocontrol Lab, Pilot Plant for Microbiological Industrial Processes (PROIMI), National Scientific and Technical Research Council (CONICET), San Miguel de Tucumán, Tucumán, Argentina, Institute of Microbiology, Faculty of Biochemistry, Chemistry and Pharmacy, National University of Tucumán, Tucumán, Argentina

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