Transient and resident Salmonella: A genomic approach to analyzing over a decade of sampling events from fish meal production and storage facilities

Johnathan Likens; Jon W. Bell; Patricia Rabideau; Stephanie Haynes; Steven Wilson; Sandra Tallent; Eric W. Brown; Julie Haendiges

doi:10.1371/journal.pone.0327222

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Open Access

Peer-reviewed

Research Article

Transient and resident Salmonella: A genomic approach to analyzing over a decade of sampling events from fish meal production and storage facilities

Johnathan Likens ,

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: Johnathan.likens@noaa.gov

Affiliation National Seafood Inspection Laboratory, NOAA Fisheries, Pascagoula, Mississippi, United States of America

https://orcid.org/0009-0000-6514-0475

⨯
Jon W. Bell,

Roles Funding acquisition, Supervision, Writing – review & editing

Affiliation National Seafood Inspection Laboratory, NOAA Fisheries, Pascagoula, Mississippi, United States of America
⨯
Patricia Rabideau,

Roles Funding acquisition, Supervision, Writing – review & editing

Affiliation National Seafood Inspection Laboratory, NOAA Fisheries, Pascagoula, Mississippi, United States of America
⨯
Stephanie Haynes,

Roles Conceptualization, Resources

Affiliation National Seafood Inspection Laboratory, NOAA Fisheries, Pascagoula, Mississippi, United States of America
⨯
Steven Wilson,

Roles Funding acquisition

Affiliation Seafood Inspection Program, NOAA Fisheries, Silver Spring, Maryland, United States of America
⨯
Sandra Tallent,

Roles Supervision, Writing – review & editing

Affiliation Division of Food Safety Genomics, United States Food and Drug Adminstration, Human Foods Program, College Park, Maryland, United States of America
⨯
Eric W. Brown,

Roles Supervision, Writing – review & editing

Affiliation Division of Food Safety Genomics, United States Food and Drug Adminstration, Human Foods Program, College Park, Maryland, United States of America
⨯
Julie Haendiges

Roles Conceptualization, Data curation, Formal analysis, Methodology, Visualization, Writing – original draft, Writing – review & editing

Affiliation Division of Food Safety Genomics, United States Food and Drug Adminstration, Human Foods Program, College Park, Maryland, United States of America
⨯

Transient and resident Salmonella: A genomic approach to analyzing over a decade of sampling events from fish meal production and storage facilities

Johnathan Likens,
Jon W. Bell,
Patricia Rabideau,
Stephanie Haynes,
Steven Wilson,
Sandra Tallent,
Eric W. Brown,
Julie Haendiges

Published: July 1, 2025
https://doi.org/10.1371/journal.pone.0327222

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Salmonella enterica
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Fish genomics
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Single nucleotide polymorphisms
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