Bag-of-words is competitive with sum-of-embeddings language-inspired representations on protein inference

• Frixos Papadopoulos ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: fp1n17@soton.ac.uk

  Affiliation Vision-Learning-Control Group, Department of Electronics and Computer Science, Faculty of Engineering and Physical Sciences, University of Southampton, Southampton, United Kingdom

  https://orcid.org/0000-0002-4429-1562

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• Tilman Sanchez-Elsner,

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – review & editing

  Affiliation Clinical and Experimental Sciences, Department of Medicine, University of Southampton, Southampton, United Kingdom

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• Mahesan Niranjan,

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Vision-Learning-Control Group, Department of Electronics and Computer Science, Faculty of Engineering and Physical Sciences, University of Southampton, Southampton, United Kingdom

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• Ashley I. Heinson

  Roles Data curation, Funding acquisition, Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Clinical Informatics Research Unit, Cancer Sciences, Department of Medicine, University of Southampton, Southampton, United Kingdom

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