Amplicon sequencing of pasteurized retail dairy enables genomic surveillance of H5N1 avian influenza virus in United States cattle

• Andrew J. Lail,

  Roles Data curation, Formal analysis, Investigation, Software, Visualization, Writing – original draft, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0002-6292-1601

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• William C. Vuyk,

  Roles Data curation, Investigation, Writing – original draft, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0002-9461-4788

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• Heather Machkovech,

  Roles Formal analysis, Investigation, Writing – original draft, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0001-5033-0786

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• Nicholas R. Minor,

  Roles Data curation, Formal analysis, Software, Visualization, Writing – review & editing

  Affiliation Wisconsin National Primate Research Center, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0003-2929-8229

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• Nura R. Hassan,

  Roles Data curation, Investigation, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0009-0007-0315-1735

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• Rhea Dalvie,

  Roles Data curation, Investigation, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

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• Isla E. Emmen,

  Roles Data curation, Investigation, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0002-4725-4935

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• Sydney Wolf,

  Roles Data curation, Investigation, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0009-0000-1625-6754

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• Annabelle Kalweit,

  Roles Software, Visualization, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0009-0002-4075-2517

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• Nancy Wilson,

  Roles Data curation, Project administration, Visualization, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0002-9472-6026

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• Christina M. Newman,

  Roles Methodology, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0002-8749-4378

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• Patrick Barros Tiburcio,

  Roles Investigation, Writing – review & editing

  Affiliation School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0001-7932-9447

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• Andrea Weiler,

  Roles Methodology, Writing – review & editing

  Affiliation Wisconsin National Primate Research Center, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0002-7130-8235

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• Thomas C. Friedrich,

  Roles Conceptualization, Funding acquisition, Resources, Supervision, Writing – review & editing

  Affiliations Wisconsin National Primate Research Center, University of Wisconsin, Madison, Wisconsin, United States of America, School of Veterinary Medicine, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0001-9831-6895

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• David H. O’Connor

  Roles Conceptualization, Funding acquisition, Resources, Software, Supervision, Writing – review & editing

  * E-mail: dhoconno@wisc.edu

  Affiliations School of Medicine and Public Health, University of Wisconsin, Madison, Wisconsin, United States of America, Wisconsin National Primate Research Center, University of Wisconsin, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0003-2139-470X

  ⨯