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Open Access

Peer-reviewed

Research Article

Benchmarking inverse folding models for antibody CDR sequence design

Yifan Li,

Roles Conceptualization, Data curation, Formal analysis, Writing – original draft, Writing – review & editing

Affiliation BioMap Research, Haidian District, Beijing, China
⨯
Yuxiang Lang,

Roles Data curation, Formal analysis

Affiliation BioMap Research, Haidian District, Beijing, China
⨯
Chenrui Xu,

Roles Data curation, Formal analysis

Affiliation BioMap Research, Haidian District, Beijing, China
⨯
Yi Zhou,

Roles Data curation, Formal analysis

Affiliation BioMap Research, Haidian District, Beijing, China

https://orcid.org/0000-0003-0969-3993

⨯
Ziwei Pang,

Roles Data curation, Formal analysis

Affiliation BioMap Research, Haidian District, Beijing, China

https://orcid.org/0009-0008-1818-7789

⨯
Per Jr. Greisen

Roles Conceptualization, Supervision, Writing – original draft, Writing – review & editing

* E-mail: per@biomap.com

Affiliations BioMap Research, Haidian District, Beijing, China, BioMap Research, Palo Alto, California, United States of America

https://orcid.org/0000-0003-4630-0044

⨯

Benchmarking inverse folding models for antibody CDR sequence design

Yifan Li,
Yuxiang Lang,
Chenrui Xu,
Yi Zhou,
Ziwei Pang,
Per Jr. Greisen

x

Published: June 4, 2025
https://doi.org/10.1371/journal.pone.0324566

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Protein structure prediction
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Substitution mutation
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Crystal structure
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Syntax
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Mutation detection
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Protein structure
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