Epigenetic background of lineage-specific gene expression landscapes of four Staphylococcus aureus hospital isolates

Ilya S. Korotetskiy; Sergey V. Shilov; Tatyana V. Kuznetsova; Natalya Zubenko; Lyudmila Ivanova; Oleg N. Reva

doi:10.1371/journal.pone.0322006

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Open Access

Peer-reviewed

Research Article

Epigenetic background of lineage-specific gene expression landscapes of four Staphylococcus aureus hospital isolates

Ilya S. Korotetskiy ,

Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Writing – original draft, Writing – review & editing

* E-mail: laeda81@gmail.com (ISK); oleg.reva@up.ac.za (ONR)

Affiliations Virology laboratory, JSC Scientific Center for Anti-Infectious Drugs, Almaty, Kazakhstan, LLC International Engineering and Technological University, Almaty, Kazakhstan, LLP Research and Production Association Kazpharmacom, Almaty, Kazakhstan

https://orcid.org/0000-0002-0397-7840

⨯
Sergey V. Shilov,

Roles Data curation, Formal analysis, Investigation, Writing – original draft, Writing – review & editing

Affiliation Virology laboratory, JSC Scientific Center for Anti-Infectious Drugs, Almaty, Kazakhstan

https://orcid.org/0000-0001-9490-9300

⨯
Tatyana V. Kuznetsova,

Roles Formal analysis, Investigation

Affiliation Virology laboratory, JSC Scientific Center for Anti-Infectious Drugs, Almaty, Kazakhstan

https://orcid.org/0000-0003-4186-3948

⨯
Natalya Zubenko,

Roles Formal analysis, Investigation

Affiliation Virology laboratory, JSC Scientific Center for Anti-Infectious Drugs, Almaty, Kazakhstan

https://orcid.org/0000-0001-6436-803X

⨯
Lyudmila Ivanova,

Roles Formal analysis, Investigation

Affiliation Virology laboratory, JSC Scientific Center for Anti-Infectious Drugs, Almaty, Kazakhstan

https://orcid.org/0000-0002-7194-0556

⨯
Oleg N. Reva

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: laeda81@gmail.com (ISK); oleg.reva@up.ac.za (ONR)

Affiliation Centre for Bioinformatics and Computational Biology, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa

https://orcid.org/0000-0002-5459-2772

⨯

Epigenetic background of lineage-specific gene expression landscapes of four Staphylococcus aureus hospital isolates

Ilya S. Korotetskiy,
Sergey V. Shilov,
Tatyana V. Kuznetsova,
Natalya Zubenko,
Lyudmila Ivanova,
Oleg N. Reva

Published: May 5, 2025
https://doi.org/10.1371/journal.pone.0322006

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Staphylococcus aureus
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DNA methylation
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Gene expression
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Genomics
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Nucleotides
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Epigenetics
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Gene regulation
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Sequence motif analysis
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