PixlMap: A generalisable pixel classifier for cellular phenotyping in multiplex immunofluorescence images

• Rachel L. Baird,

  Roles Investigation, Methodology, Validation, Visualization, Writing – original draft

  Affiliation Cancer Research UK Scotland Institute, Glasgow, United Kingdom

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• David Mason,

  Roles Conceptualization, Methodology, Writing – review & editing

  Affiliation Visiopharm A/S, Horsholm, Denmark

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• Kai Rakovic,

  Roles Formal analysis, Investigation, Validation, Visualization, Writing – review & editing

  Affiliations Cancer Research UK Scotland Institute, Glasgow, United Kingdom, School of Cancer Sciences, University of Glasgow, Glasgow, United Kingdom, Department of Histopathology, Queen Elizabeth University Hospital, Glasgow, United Kingdom

  https://orcid.org/0000-0002-0676-1973

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• Fiona Ballantyne,

  Roles Visualization, Writing – review & editing

  Affiliation Cancer Research UK Scotland Institute, Glasgow, United Kingdom

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• Ian R. Powley,

  Roles Methodology, Visualization, Writing – review & editing

  Affiliation Cancer Research UK Scotland Institute, Glasgow, United Kingdom

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• Anastasia Georgakopoulou,

  Roles Investigation, Resources, Writing – review & editing

  Affiliations Cancer Research UK Scotland Institute, Glasgow, United Kingdom, School of Cancer Sciences, University of Glasgow, Glasgow, United Kingdom

  https://orcid.org/0000-0001-9328-7466

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• Lucy Hillary,

  Roles Visualization, Writing – review & editing

  Affiliation School of Cancer Sciences, University of Glasgow, Glasgow, United Kingdom

  https://orcid.org/0009-0006-6748-8487

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• Thomas G. Bird,

  Roles Funding acquisition, Resources, Writing – review & editing

  Affiliations Cancer Research UK Scotland Institute, Glasgow, United Kingdom, School of Cancer Sciences, University of Glasgow, Glasgow, United Kingdom, MRC Centre for Inflammation Research, The Queen’s Medical Research Institute, University of Edinburgh, Edinburgh, United Kingdom

  https://orcid.org/0000-0002-6120-1581

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• Leah Officer-Jones ,

  Roles Conceptualization, Methodology, Supervision, Writing – original draft

  * E-mail: l.officer-jones@crukscotlandinstitute.ac.uk (LOJ); John.LeQuesne@glasgow.ac.uk (JLQ)

  Affiliation Cancer Research UK Scotland Institute, Glasgow, United Kingdom

  https://orcid.org/0000-0002-3690-2386

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• John Le Quesne

  Roles Conceptualization, Funding acquisition, Resources, Supervision, Writing – review & editing

  * E-mail: l.officer-jones@crukscotlandinstitute.ac.uk (LOJ); John.LeQuesne@glasgow.ac.uk (JLQ)

  Affiliations Cancer Research UK Scotland Institute, Glasgow, United Kingdom, School of Cancer Sciences, University of Glasgow, Glasgow, United Kingdom, Department of Histopathology, Queen Elizabeth University Hospital, Glasgow, United Kingdom

  https://orcid.org/0000-0003-3552-7446

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