Clonal phylogenies inferred from bulk, single cell, and spatial transcriptomic analysis of epithelial cancers

• Andrew Erickson ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: andrew.erickson@nds.ox.ac.uk

  Affiliations Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom, Research Program in Systems Oncology, University of Helsinki, Helsinki, Finland

  https://orcid.org/0000-0002-4850-4086

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• Sandy Figiel,

  Roles Formal analysis, Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Timothy Rajakumar,

  Roles Data curation, Formal analysis, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Srinivasa Rao,

  Roles Data curation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Wencheng Yin,

  Roles Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Dimitrios Doultsinos,

  Roles Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Anette Magnussen,

  Roles Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Reema Singh,

  Roles Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Ninu Poulose,

  Roles Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Richard J. Bryant,

  Roles Writing – original draft, Writing – review & editing

  Affiliations Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom, Department of Urology, Oxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom

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• Olivier Cussenot,

  Roles Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

  https://orcid.org/0000-0002-9912-0533

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• Freddie C. Hamdy,

  Roles Writing – original draft, Writing – review & editing

  Affiliations Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom, Department of Urology, Oxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom

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• Dan Woodcock,

  Roles Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Ian G. Mills,

  Roles Conceptualization, Project administration, Supervision, Writing – original draft, Writing – review & editing

  Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom

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• Alastair D. Lamb

  Roles Conceptualization, Formal analysis, Funding acquisition, Project administration, Supervision, Writing – original draft, Writing – review & editing

  Affiliations Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom, Department of Urology, Oxford University Hospitals NHS Foundation Trust, Oxford, United Kingdom

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