Two different and robustly modeled DNA binding modes of Competence Protein ComP - systematic modeling with AlphaFold 3, RoseTTAFold2NA, Chai-1 and re-docking in HADDOCK

• Stian Aleksander Helsem,

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Life Sciences and Health, Faculty of Health Sciences, OsloMet, Oslo, Norway

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• Kristian Alfsnes,

  Roles Supervision, Writing – review & editing

  Affiliation Division for Infection Control, Department of Bacteriology, Norwegian Institute of Public Health, Oslo, Norway

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• Stephan A. Frye,

  Roles Supervision, Writing – review & editing

  Affiliation Division of Laboratory Medicine, Department of Microbiology, Oslo University Hospital, Oslo, Norway

  https://orcid.org/0000-0002-0786-8481

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• Alexander Hesselberg Løvestad,

  Roles Supervision, Writing – review & editing

  Affiliations Department of Life Sciences and Health, Faculty of Health Sciences, OsloMet, Oslo, Norway, Department of Virology, Norwegian Institute of Public Health, Oslo, Norway

  https://orcid.org/0000-0001-6553-5194

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• Ole Herman Ambur

  Roles Conceptualization, Funding acquisition, Project administration, Resources, Supervision, Visualization, Writing – review & editing

  * E-mail: olam@oslomet.no

  Affiliation Department of Life Sciences and Health, Faculty of Health Sciences, OsloMet, Oslo, Norway

  https://orcid.org/0000-0001-9870-6375

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