Computational reassessment of RNA-seq data reveals key genes in active tuberculosis

Rakesh Arya; Hemlata Shakya; Reetika Chaurasia; Surendra Kumar; Joseph M. Vinetz; Jong Joo Kim

doi:10.1371/journal.pone.0305582

Loading metrics

Open Access

Peer-reviewed

Research Article

Computational reassessment of RNA-seq data reveals key genes in active tuberculosis

Rakesh Arya ,

Contributed equally to this work with: Rakesh Arya, Hemlata Shakya

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

Affiliation Department of Biotechnology, Yeungnam University, Gyeongsan, Gyeongbuk, South Korea

https://orcid.org/0000-0003-2089-0891

⨯
Hemlata Shakya ,

Contributed equally to this work with: Rakesh Arya, Hemlata Shakya

Roles Formal analysis, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

Affiliation Department of Biomedical Engineering, Shri G. S. Institute of Technology and Science, Indore, Madhya Pradesh, India
⨯
Reetika Chaurasia ,

Roles Data curation, Formal analysis, Investigation, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: kimjj@ynu.ac.kr (JJK); reetika.chaurasia@yale.edu (RC)

Affiliation Department of Internal Medicine, Section of Infectious Diseases, Yale University School of Medicine, New Haven, CT, United States of America

https://orcid.org/0000-0002-7718-4720

⨯
Surendra Kumar,

Roles Formal analysis, Visualization, Writing – original draft, Writing – review & editing

Affiliation Department of Orthopaedic Surgery, The Johns Hopkins University School of Medicine, Baltimore, MD, United States of America
⨯
Joseph M. Vinetz,

Roles Formal analysis, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

Affiliation Department of Internal Medicine, Section of Infectious Diseases, Yale University School of Medicine, New Haven, CT, United States of America
⨯
Jong Joo Kim

Roles Conceptualization, Formal analysis, Investigation, Methodology, Project administration, Resources, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: kimjj@ynu.ac.kr (JJK); reetika.chaurasia@yale.edu (RC)

Affiliation Department of Biotechnology, Yeungnam University, Gyeongsan, Gyeongbuk, South Korea
⨯

Computational reassessment of RNA-seq data reveals key genes in active tuberculosis

Rakesh Arya,
Hemlata Shakya,
Reetika Chaurasia,
Surendra Kumar,
Joseph M. Vinetz,
Jong Joo Kim

Published: June 27, 2024
https://doi.org/10.1371/journal.pone.0305582

Reader Comments (0)

Post a new comment on this article

Subject Areas
?

For more information about PLOS Subject Areas, click here.
We want your feedback. Do these Subject Areas make sense for this article? Click the target next to the incorrect Subject Area and let us know. Thanks for your help!

Tuberculosis
Is the Subject Area "Tuberculosis" applicable to this article?

Thanks for your feedback.
Mycobacterium tuberculosis
Is the Subject Area "Mycobacterium tuberculosis" applicable to this article?

Thanks for your feedback.
Tuberculosis diagnosis and management
Is the Subject Area "Tuberculosis diagnosis and management" applicable to this article?

Thanks for your feedback.
Immune response
Is the Subject Area "Immune response" applicable to this article?

Thanks for your feedback.
Interferons
Is the Subject Area "Interferons" applicable to this article?

Thanks for your feedback.
Gene expression
Is the Subject Area "Gene expression" applicable to this article?

Thanks for your feedback.
Gene ontologies
Is the Subject Area "Gene ontologies" applicable to this article?

Thanks for your feedback.
Protein domains
Is the Subject Area "Protein domains" applicable to this article?

Thanks for your feedback.