Genotyping-by-sequencing and weighted gene co-expression network analysis of genes responsive against Potato virus Y in commercial potato cultivars

Zahra Hajibarat; Abbas Saidi; Mehrshad Zeinalabedini; Ahmad Mousapour Gorji; Mohammad Reza Ghaffari; Vahid Shariati; Rahim Ahmadvand

doi:10.1371/journal.pone.0303783

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Open Access

Peer-reviewed

Research Article

Genotyping-by-sequencing and weighted gene co-expression network analysis of genes responsive against Potato virus Y in commercial potato cultivars

Zahra Hajibarat,

Roles Data curation, Formal analysis, Writing – original draft

Affiliation Faculty of Life Sciences & Biotechnology, Department of Cell & Molecular Biology, Shahid Beheshti University, Tehran, Iran
⨯
Abbas Saidi ,

Roles Conceptualization, Supervision, Writing – review & editing

* E-mail: abbas.saidi@gmail.com (AS); m_zeinalabedini@yahoo.com (MZ)

Affiliation Faculty of Life Sciences & Biotechnology, Department of Cell & Molecular Biology, Shahid Beheshti University, Tehran, Iran
⨯
Mehrshad Zeinalabedini ,

Roles Conceptualization, Supervision, Writing – review & editing

* E-mail: abbas.saidi@gmail.com (AS); m_zeinalabedini@yahoo.com (MZ)

Affiliation Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran

https://orcid.org/0000-0002-3436-4334

⨯
Ahmad Mousapour Gorji,

Roles Resources, Writing – review & editing

Affiliation Department of Vegetable Research, Seed and Plant Improvement Institute (SPII), Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
⨯
Mohammad Reza Ghaffari,

Roles Formal analysis, Writing – review & editing

Affiliation Department of Systems and Synthetic Biology, Agricultural Biotechnology Research Institute of Iran, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran

https://orcid.org/0000-0002-7139-8613

⨯
Vahid Shariati,

Roles Formal analysis, Writing – review & editing

Affiliation National Institute of Genetic Engineering and Biotechnology, NIGEB Genome Center, Tehran, Iran
⨯
Rahim Ahmadvand

Roles Resources, Writing – review & editing

Affiliation Department of Vegetable Research, Seed and Plant Improvement Institute (SPII), Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
⨯

Genotyping-by-sequencing and weighted gene co-expression network analysis of genes responsive against Potato virus Y in commercial potato cultivars

Zahra Hajibarat,
Abbas Saidi,
Mehrshad Zeinalabedini,
Ahmad Mousapour Gorji,
Mohammad Reza Ghaffari,
Vahid Shariati,
Rahim Ahmadvand

Published: May 24, 2024
https://doi.org/10.1371/journal.pone.0303783

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Potato
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Population genetics
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Plant breeding
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Single nucleotide polymorphisms
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Gene expression
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