Prevalence, genetic diversity and eco-epidemiology of pathogenic Leptospira species in small mammal communities in urban parks Lyon city, France

• Marta Garcia-Lopez,

  Roles Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft

  Affiliations USC 1233-RS2GP, VetAgro Sup, University of Lyon, Marcy l’Etoile, France, Biology of Spirochetes Unit, National Reference Center for Leptospirosis, Institut Pasteur, University of Paris Cité, Paris, France

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• Thibaut Lurier,

  Roles Formal analysis, Software, Validation, Writing – original draft

  Affiliations UMR EPIA, INRAE, VetAgro Sup, University of Clermont Auvergne, Saint-Genès-Champanelle, France, UMR EPIA, INRAE, VetAgro Sup, University of Lyon, Marcy l’Etoile, France

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• Marie Bouilloud,

  Roles Data curation, Investigation, Writing – review & editing

  Affiliation CBGP, INRAE, CIRAD, Institut Agro, IRD, University of Montpellier, Montpellier, France

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• Julien Pradel,

  Roles Data curation, Investigation

  Affiliation CBGP, INRAE, CIRAD, Institut Agro, IRD, University of Montpellier, Montpellier, France

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• Caroline Tatard,

  Roles Methodology

  Affiliation CBGP, INRAE, CIRAD, Institut Agro, IRD, University of Montpellier, Montpellier, France

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• Diana Sepulveda,

  Roles Conceptualization, Writing – review & editing

  Affiliation Department of Health, Health and Environment Service, City of Lyon, Lyon, France

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• Gwendoline Anfray,

  Roles Conceptualization, Writing – review & editing

  Affiliation Tête d’Or Park Zoo, Lyon, France

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• Julie Dussert,

  Roles Conceptualization, Writing – review & editing

  Affiliation Domain of Lacroix-Laval, Marcy l’Etoile, France

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• Pascale Bourhy,

  Roles Funding acquisition, Project administration, Writing – review & editing

  Affiliation Biology of Spirochetes Unit, National Reference Center for Leptospirosis, Institut Pasteur, University of Paris Cité, Paris, France

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• Nathalie Charbonnel,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliation CBGP, INRAE, CIRAD, Institut Agro, IRD, University of Montpellier, Montpellier, France

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• Zouheira Djelouadji

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Project administration, Resources, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: zoree.djelouadji@vetagro-sup.fr

  Affiliation USC 1233-RS2GP, VetAgro Sup, University of Lyon, Marcy l’Etoile, France

  https://orcid.org/0000-0002-5793-5144

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