Integrating microbial abundance time series with fermentation dynamics of the rumen microbiome via mathematical modelling

• Mohsen Davoudkhani ,

  Contributed equally to this work with: Mohsen Davoudkhani, Francesco Rubino

  Roles Conceptualization, Formal analysis, Methodology, Software, Writing – original draft

  Affiliation INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, Université Paris-Saclay, Palaiseau, France

  https://orcid.org/0000-0001-5924-506X

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• Francesco Rubino ,

  Contributed equally to this work with: Mohsen Davoudkhani, Francesco Rubino

  Roles Conceptualization, Data curation, Formal analysis, Methodology, Software, Writing – original draft

  Affiliation Institute of Global Food Security, School of Biological Sciences, Queen’s University Belfast, Northern Ireland, United Kingdom

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• Christopher J. Creevey,

  Roles Conceptualization, Methodology, Supervision, Writing – review & editing

  Affiliation Institute of Global Food Security, School of Biological Sciences, Queen’s University Belfast, Northern Ireland, United Kingdom

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• Seppo Ahvenjärvi,

  Roles Conceptualization, Investigation, Writing – review & editing

  Affiliation Animal Nutrition, Production Systems, Natural Resources Institute Finland (Luke), Jokioinen, Finland

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• Ali R. Bayat,

  Roles Conceptualization, Investigation, Writing – review & editing

  Affiliation Animal Nutrition, Production Systems, Natural Resources Institute Finland (Luke), Jokioinen, Finland

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• Ilma Tapio,

  Roles Conceptualization, Data curation, Investigation, Writing – review & editing

  Affiliation Genomics and Breeding, Production Systems, Natural Resources Institute Finland (Luke), Jokioinen, Finland

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• Alejandro Belanche,

  Roles Conceptualization, Data curation, Investigation, Writing – review & editing

  Affiliation Departamento de Producción Animal y Ciencia de los Alimentos, Universidad de Zaragoza, Zaragoza, Spain

  https://orcid.org/0000-0001-5880-6021

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• Rafael Muñoz-Tamayo

  Roles Conceptualization, Formal analysis, Methodology, Project administration, Software, Supervision, Writing – original draft

  * E-mail: Rafael.munoz-tamayo@inrae.fr

  Affiliation INRAE, AgroParisTech, UMR Modélisation Systémique Appliquée aux Ruminants, Université Paris-Saclay, Palaiseau, France

  https://orcid.org/0000-0002-9266-4132

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