Benchmarking variational AutoEncoders on cancer transcriptomics data

• Mostafa Eltager,

  Roles Formal analysis, Methodology, Software, Writing – original draft

  Affiliation Delft Bioinformatics Lab, Delft University of Technology, Delft, The Netherlands

  https://orcid.org/0000-0002-2392-7517

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• Tamim Abdelaal,

  Roles Methodology, Writing – review & editing

  Affiliations Delft Bioinformatics Lab, Delft University of Technology, Delft, The Netherlands, Department of Radiology, Leiden University Medical Center, Leiden, The Netherlands

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• Mohammed Charrout,

  Roles Methodology

  Affiliation Delft Bioinformatics Lab, Delft University of Technology, Delft, The Netherlands

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• Ahmed Mahfouz,

  Roles Methodology, Supervision, Writing – review & editing

  Affiliations Delft Bioinformatics Lab, Delft University of Technology, Delft, The Netherlands, Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands, Leiden Computational Biology Center, Leiden University Medical Center, Leiden, The Netherlands

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• Marcel J. T. Reinders,

  Roles Methodology, Supervision, Writing – review & editing

  Affiliations Delft Bioinformatics Lab, Delft University of Technology, Delft, The Netherlands, Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands, Leiden Computational Biology Center, Leiden University Medical Center, Leiden, The Netherlands

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• Stavros Makrodimitris

  Roles Methodology, Supervision, Writing – review & editing

  * E-mail: s.makrodimitris@erasmusmc.nl

  Affiliations Delft Bioinformatics Lab, Delft University of Technology, Delft, The Netherlands, Department of Medical Oncology, Erasmus Medical Center, Rotterdam, The Netherlands

  https://orcid.org/0000-0002-3111-4268

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