Integrated analysis of human DNA methylation, gene expression, and genomic variation in iMETHYL database using kernel tensor decomposition-based unsupervised feature extraction

Y-h. Taguchi; Shohei Komaki; Yoichi Sutoh; Hideki Ohmomo; Yayoi Otsuka-Yamasaki; Atsushi Shimizu

doi:10.1371/journal.pone.0289029

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Open Access

Peer-reviewed

Research Article

Integrated analysis of human DNA methylation, gene expression, and genomic variation in iMETHYL database using kernel tensor decomposition-based unsupervised feature extraction

Y-h. Taguchi ,

Roles Conceptualization, Formal analysis, Investigation, Writing – original draft, Writing – review & editing

* E-mail: tag@granular.com

Affiliation Department of Physics, Chuo University, Tokyo, Japan

https://orcid.org/0000-0003-0867-8986

⨯
Shohei Komaki,

Roles Conceptualization, Investigation, Writing – review & editing

Affiliation Division of Biomedical Information Analysis, Iwate Tohoku Medical Megabank Organization, Disaster Reconstruction Center, Iwate Medical University, Iwate, Japan
⨯
Yoichi Sutoh,

Roles Conceptualization, Investigation, Writing – review & editing

Affiliation Division of Biomedical Information Analysis, Iwate Tohoku Medical Megabank Organization, Disaster Reconstruction Center, Iwate Medical University, Iwate, Japan
⨯
Hideki Ohmomo,

Roles Conceptualization, Investigation, Writing – review & editing

Affiliation Division of Biomedical Information Analysis, Iwate Tohoku Medical Megabank Organization, Disaster Reconstruction Center, Iwate Medical University, Iwate, Japan
⨯
Yayoi Otsuka-Yamasaki,

Roles Conceptualization, Investigation, Writing – review & editing

Affiliation Division of Biomedical Information Analysis, Iwate Tohoku Medical Megabank Organization, Disaster Reconstruction Center, Iwate Medical University, Iwate, Japan
⨯
Atsushi Shimizu

Roles Conceptualization, Investigation, Writing – review & editing

Affiliation Division of Biomedical Information Analysis, Iwate Tohoku Medical Megabank Organization, Disaster Reconstruction Center, Iwate Medical University, Iwate, Japan
⨯

Integrated analysis of human DNA methylation, gene expression, and genomic variation in iMETHYL database using kernel tensor decomposition-based unsupervised feature extraction

Y-h. Taguchi,
Shohei Komaki,
Yoichi Sutoh,
Hideki Ohmomo,
Yayoi Otsuka-Yamasaki,
Atsushi Shimizu

Published: August 9, 2023
https://doi.org/10.1371/journal.pone.0289029

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DNA methylation
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