Analyzing the correlation between protein expression and sequence-related features of mRNA and protein in Escherichia coli K-12 MG1655 model

Nhat H.M. Truong; Nam T. Vo; Binh T. Nguyen; Son T. Huynh; Hoang D. Nguyen

doi:10.1371/journal.pone.0288526

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Open Access

Peer-reviewed

Research Article

Analyzing the correlation between protein expression and sequence-related features of mRNA and protein in Escherichia coli K-12 MG1655 model

Nhat H.M. Truong,

Roles Data curation, Formal analysis, Investigation, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

Affiliations Center for Bioscience and Biotechnology, University of Science, Ho Chi Minh City, Vietnam, Vietnam National University, Ho Chi Minh City, Vietnam
⨯
Nam T. Vo,

Roles Conceptualization, Data curation, Methodology, Project administration, Software, Supervision, Validation, Visualization, Writing – review & editing

Affiliations Center for Bioscience and Biotechnology, University of Science, Ho Chi Minh City, Vietnam, Vietnam National University, Ho Chi Minh City, Vietnam, Laboratory of Molecular Biotechnology, University of Science, Ho Chi Minh City, Vietnam
⨯
Binh T. Nguyen,

Roles Data curation, Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Writing – review & editing

Affiliations Vietnam National University, Ho Chi Minh City, Vietnam, Department of Computer Science, University of Science, Ho Chi Minh City, Vietnam
⨯
Son T. Huynh,

Roles Formal analysis, Investigation, Methodology, Software, Validation, Writing – review & editing

Affiliations Vietnam National University, Ho Chi Minh City, Vietnam, Department of Computer Science, University of Science, Ho Chi Minh City, Vietnam
⨯
Hoang D. Nguyen

Roles Conceptualization, Data curation, Formal analysis, Methodology, Resources, Supervision, Validation, Writing – review & editing

* E-mail: ndhoang@hcmus.edu.vn

Affiliations Center for Bioscience and Biotechnology, University of Science, Ho Chi Minh City, Vietnam, Vietnam National University, Ho Chi Minh City, Vietnam

https://orcid.org/0000-0003-2437-3568

⨯

Analyzing the correlation between protein expression and sequence-related features of mRNA and protein in Escherichia coli K-12 MG1655 model

Nhat H.M. Truong,
Nam T. Vo,
Binh T. Nguyen,
Son T. Huynh,
Hoang D. Nguyen

Published: February 7, 2024
https://doi.org/10.1371/journal.pone.0288526

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Protein translation
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Messenger RNA
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Escherichia coli
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Operons
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Protein expression
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Translation initiation
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Machine learning
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Machine learning algorithms
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