Cell-specific imputation of drug connectivity mapping with incomplete data

Diana Sapashnik; Rebecca Newman; Christopher Michael Pietras; Di Zhou; Kapil Devkota; Fangfang Qu; Lior Kofman; Sean Boudreau; Inbar Fried; Donna K. Slonim

doi:10.1371/journal.pone.0278289

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Open Access

Peer-reviewed

Research Article

Cell-specific imputation of drug connectivity mapping with incomplete data

Diana Sapashnik ,

Contributed equally to this work with: Diana Sapashnik, Rebecca Newman, Christopher Michael Pietras

Roles Conceptualization, Data curation, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliation Department of Computer Science, Tufts University, Medford, MA, United States of America
⨯
Rebecca Newman ,

Contributed equally to this work with: Diana Sapashnik, Rebecca Newman, Christopher Michael Pietras

Roles Conceptualization, Data curation, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliation Department of Computer Science, Tufts University, Medford, MA, United States of America
⨯
Christopher Michael Pietras ,

Contributed equally to this work with: Diana Sapashnik, Rebecca Newman, Christopher Michael Pietras

Roles Conceptualization, Data curation, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliation Department of Computer Science, Tufts University, Medford, MA, United States of America
⨯
Di Zhou,

Roles Software, Writing – review & editing

Affiliation Department of Computer Science, Tufts University, Medford, MA, United States of America
⨯
Kapil Devkota,

Roles Validation, Writing – review & editing

Affiliation Department of Computer Science, Tufts University, Medford, MA, United States of America
⨯
Fangfang Qu,

Roles Conceptualization, Methodology, Writing – review & editing

Affiliation Department of Computer Science, Tufts University, Medford, MA, United States of America
⨯
Lior Kofman,

Roles Data curation, Software, Writing – review & editing

Affiliation Department of Computer Science, Tufts University, Medford, MA, United States of America
⨯
Sean Boudreau,

Roles Conceptualization, Methodology, Software, Writing – review & editing

Affiliation Department of Computer Science, Tufts University, Medford, MA, United States of America
⨯
Inbar Fried,

Roles Methodology, Software, Writing – review & editing

Affiliation Department of Medicine, University of North Carolina School of Medicine, Chapel Hill, NC, United States of America
⨯
Donna K. Slonim

Roles Conceptualization, Funding acquisition, Methodology, Supervision, Writing – original draft, Writing – review & editing

* E-mail: donna.slonim@tufts.edu

Affiliations Department of Computer Science, Tufts University, Medford, MA, United States of America, Department of Immunology, Tufts University School of Medicine, Boston, MA, United States of America

https://orcid.org/0000-0003-3357-437X

⨯

Cell-specific imputation of drug connectivity mapping with incomplete data

Diana Sapashnik,
Rebecca Newman,
Christopher Michael Pietras,
Di Zhou,
Kapil Devkota,
Fangfang Qu,
Lior Kofman,
Sean Boudreau,
Inbar Fried,
Donna K. Slonim

Published: February 16, 2023
https://doi.org/10.1371/journal.pone.0278289

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