Association between ustekinumab therapy and changes in specific anti-microbial response, serum biomarkers, and microbiota composition in patients with IBD: A pilot study

• Filip Rob,

  Roles Conceptualization, Investigation, Methodology, Resources, Writing – original draft

  Affiliation Second Faculty of Medicine, Dermatovenerology Department, University Hospital Bulovka, Charles University, Prague, Czech Republic

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• Dagmar Schierova,

  Roles Data curation, Formal analysis, Visualization, Writing – original draft

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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• Zuzana Stehlikova,

  Roles Investigation, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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• Jakub Kreisinger,

  Roles Data curation, Formal analysis, Visualization, Writing – review & editing

  Affiliation Faculty of Science, Department of Zoology, Charles University, Prague, Czech Republic

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• Radka Roubalova,

  Roles Investigation, Visualization, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

  https://orcid.org/0000-0002-9298-4734

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• Stepan Coufal,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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• Martin Mihula,

  Roles Investigation, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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• Zuzana Jackova,

  Roles Investigation, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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• Miloslav Kverka,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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• Tomas Thon,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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• Klara Kostovcikova,

  Roles Investigation, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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• Lukas Bajer,

  Roles Investigation, Resources, Writing – review & editing

  Affiliations Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic, Hepatogastroenterology Department, Institute for Clinical and Experimental Medicine, Prague, Czech Republic

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• Pavel Drastich,

  Roles Resources, Writing – review & editing

  Affiliation Hepatogastroenterology Department, Institute for Clinical and Experimental Medicine, Prague, Czech Republic

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• Jana Tresnak Hercogova,

  Roles Conceptualization, Funding acquisition, Writing – review & editing

  Affiliation Second Faculty of Medicine, Dermatovenerology Department, University Hospital Bulovka, Charles University, Prague, Czech Republic

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• Michaela Novakova,

  Roles Investigation, Resources, Writing – review & editing

  Affiliation Second Faculty of Medicine, Dermatovenerology Department, University Hospital Bulovka, Charles University, Prague, Czech Republic

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• Martin Kolar,

  Roles Conceptualization, Resources, Writing – review & editing

  Affiliation ISCARE a.s., IBD Clinical and Research Centre, Prague, Czech Republic

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• Martin Vasatko,

  Roles Resources, Writing – review & editing

  Affiliation ISCARE a.s., IBD Clinical and Research Centre, Prague, Czech Republic

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• Milan Lukas,

  Roles Resources, Writing – review & editing

  Affiliations ISCARE a.s., IBD Clinical and Research Centre, Prague, Czech Republic, General University Hospital and First Faculty of Medicine, Institute of Medical Biochemistry and Laboratory Diagnostics, Charles University, Prague, Czech Republic

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• Helena Tlaskalova-Hogenova,

  Roles Conceptualization, Methodology, Writing – review & editing

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

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•  [ ... ],
• Zuzana Jiraskova Zakostelska

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Writing – original draft

  * E-mail: zakostelska@biomed.cas.cz

  Affiliation Laboratory of Cellular and Molecular Immunology, Institute of Microbiology of the Czech Academy of Sciences, Prague, Czech Republic

  https://orcid.org/0000-0002-6695-8188

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