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Open Access
Peer-reviewed
Research Article
Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania
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Kady D. Waggle ,
Roles Data curation, Investigation, Methodology, Project administration, Writing – original draft
* E-mail: kdw41@pitt.edu (KDW); lharriso@edc.pitt.edu (LHH); jwmarsh@pitt.edu (JWM)
Affiliations Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America
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Marissa P. Griffith,
Roles Data curation, Formal analysis, Software, Writing – review & editing
Affiliations Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America
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Lei Zhu,
Roles Data curation, Formal analysis, Writing – review & editing
Affiliations Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America
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Vaughn S. Cooper,
Roles Validation, Writing – review & editing
Affiliation Department of Microbiology and Molecular Genetics and Center for Evolutionary Biology and Medicine, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America
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Daniel J. Snyder,
Roles Methodology, Writing – review & editing
Affiliation Microbial Genome Sequencing Center, LLC, Pittsburgh, Pennsylvania, United States of America
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Vatsala Srinivasa,
Roles Data curation, Investigation, Writing – review & editing
Affiliations Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America
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Tung Phan,
Roles Investigation, Methodology, Writing – review & editing
Affiliation Department of Pathology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America
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Alan Wells,
Roles Investigation, Methodology, Writing – review & editing
Affiliation Department of Pathology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America
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Graham M. Snyder,
Roles Investigation, Writing – review & editing
Affiliation Department of Infection Control and Hospital Epidemiology, UPMC Presbyterian, Pittsburgh, Pennsylvania, United States of America
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Daria Van Tyne,
Roles Conceptualization, Formal analysis, Project administration, Writing – original draft, Writing – review & editing
Affiliation Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America
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Lee H. Harrison ,
Roles Conceptualization, Formal analysis, Investigation, Supervision, Writing – review & editing
* E-mail: kdw41@pitt.edu (KDW); lharriso@edc.pitt.edu (LHH); jwmarsh@pitt.edu (JWM)
Affiliations Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America, Department of Epidemiology, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America
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Jane W. Marsh
Roles Conceptualization, Data curation, Formal analysis, Methodology, Project administration, Supervision, Validation, Writing – original draft, Writing – review & editing
* E-mail: kdw41@pitt.edu (KDW); lharriso@edc.pitt.edu (LHH); jwmarsh@pitt.edu (JWM)
Affiliations Microbial Genomics Epidemiology Laboratory, Center for Genomic Epidemiology, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America, Division of Infectious Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America
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Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania
- Kady D. Waggle,
- Marissa P. Griffith,
- Lei Zhu,
- Vaughn S. Cooper,
- Daniel J. Snyder,
- Vatsala Srinivasa,
- Tung Phan,
- Alan Wells,
- Graham M. Snyder,
- Daria Van Tyne
- Published: August 31, 2022
- https://doi.org/10.1371/journal.pone.0272954