Mycobacterium avium subsp. paratuberculosis and microbiome profile of patients in a referral gastrointestinal diseases centre in the Sudan

• Wisal A. Elmagzoub,

  Roles Conceptualization, Data curation, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Unit of Animal Health and Safety of Animal Products, Institute for Studies and Promotion of Animal Exports, University of Khartoum, Shambat, Khartoum North, Sudan, Department of Biology and Biotechnology, College of Applied and Industrial Sciences, University of Bahri, Khartoum North, Sudan

  ⨯
• Sanaa M. Idris,

  Roles Conceptualization, Investigation, Methodology, Validation, Writing – review & editing

  Affiliations Unit of Animal Health and Safety of Animal Products, Institute for Studies and Promotion of Animal Exports, University of Khartoum, Shambat, Khartoum North, Sudan, Faculty of Veterinary Medicine, Department of Pathology, University of Khartoum, Shambat, Khartoum North, Sudan

  ⨯
• Maha Isameldin,

  Roles Data curation, Investigation, Resources

  Affiliation Ibn Sina Specialised Hospital, Mohammed Najeeb St, Khartoum, Sudan

  ⨯
• Nassir Arabi,

  Roles Investigation, Resources, Writing – review & editing

  Affiliations Ibn Sina Specialised Hospital, Mohammed Najeeb St, Khartoum, Sudan, Omdurman Islamic University, Omdurman, Sudan

  ⨯
• Abdelmonem Abdo,

  Roles Investigation, Resources

  Affiliation National centre for gastroenterology and liver diseases, Ministry of Health, Khartoum, Sudan

  ⨯
• Mustafa Ibrahim,

  Roles Investigation, Resources

  Affiliation Ibn Sina Specialised Hospital, Mohammed Najeeb St, Khartoum, Sudan

  ⨯
• Md Anik Ashfaq Khan,

  Roles Formal analysis, Visualization

  Affiliation Faculty of Veterinary Medicine, Institute of Animal Hygiene and Veterinary Public Health, University of Leipzig, Leipzig, Germany

  https://orcid.org/0000-0003-2963-7649

  ⨯
• Franziska Tanneberger,

  Roles Data curation

  Affiliation Faculty of Veterinary Medicine, Institute of Animal Hygiene and Veterinary Public Health, University of Leipzig, Leipzig, Germany

  ⨯
• Sahar M. Bakhiet,

  Roles Writing – review & editing

  Affiliation Department of Molecular biology, Institute of Endemic diseases, Khartoum, Sudan

  https://orcid.org/0000-0003-0266-5180

  ⨯
• Julius B. Okuni,

  Roles Conceptualization, Funding acquisition, Methodology, Resources, Writing – review & editing

  Affiliation College of Veterinary Medicine, Animal Resources and Biosecurity (COVAB), Makerere University, Kampala, Uganda

  ⨯
• Lonzy Ojok,

  Roles Conceptualization, Methodology, Writing – review & editing

  Affiliations College of Veterinary Medicine, Animal Resources and Biosecurity (COVAB), Makerere University, Kampala, Uganda, Faculty of Medicine, Department of Pathology, Gulu University, Gulu, Uganda

  ⨯
• Ahmed A. Gameel,

  Roles Methodology, Writing – review & editing

  Affiliation Faculty of Veterinary Medicine, Department of Pathology, University of Khartoum, Shambat, Khartoum North, Sudan

  ⨯
• Ahmed Abd El Wahed ,

  Roles Conceptualization, Data curation, Funding acquisition, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: kamal@uofk.edu (KHE); ahmed.abd_el_wahed@uni-Leipzig.de (AAEW)

  Affiliation Faculty of Veterinary Medicine, Institute of Animal Hygiene and Veterinary Public Health, University of Leipzig, Leipzig, Germany

  https://orcid.org/0000-0003-3347-6075

  ⨯
• Michaël Bekaert,

  Roles Formal analysis, Visualization

  Affiliation Faculty of Natural Sciences, Institute of Aquaculture, University of Stirling, Stirling, Scotland, United Kingdom

  ⨯
• Mohamed E. Mukhtar,

  Roles Formal analysis, Writing – review & editing

  Affiliation Faculty of Agriculture, Department of Agricultural Extension and Rural Development, University of Khartoum, Shambat Khartoum North, Sudan

  ⨯
• Ahmad Amanzada,

  Roles Funding acquisition, Investigation, Project administration, Resources, Writing – review & editing

  Affiliation Department of Gastroenterology and Gastrointestinal Oncology, University Medical Centre Göttingen, Göttingen, Germany

  ⨯
• Kamal H. Eltom ,

  Roles Conceptualization, Data curation, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: kamal@uofk.edu (KHE); ahmed.abd_el_wahed@uni-Leipzig.de (AAEW)

  Affiliation Unit of Animal Health and Safety of Animal Products, Institute for Studies and Promotion of Animal Exports, University of Khartoum, Shambat, Khartoum North, Sudan

  ⨯
•  [ ... ],
• ElSagad Eltayeb

  Contributed equally to this work with: ElSagad Eltayeb

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Visualization, Writing – review & editing

  Affiliations Ibn Sina Specialised Hospital, Mohammed Najeeb St, Khartoum, Sudan, Faculty of Medicine, Al Neelain University, Khartoum, Sudan

  https://orcid.org/0000-0002-2120-9933

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