RespiCoV: Simultaneous identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and 46 respiratory tract viruses and bacteria by amplicon-based Oxford-Nanopore MinION sequencing

• Annika Brinkmann ,

  Roles Conceptualization, Data curation, Writing – original draft

  * E-mail: brinkmanna@rki.de

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

  https://orcid.org/0000-0002-9556-4698

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• Steven Uddin,

  Roles Formal analysis

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

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• Sophie-Luisa Ulm,

  Roles Formal analysis

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

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• Katharina Pape,

  Roles Formal analysis

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

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• Sophie Förster,

  Roles Formal analysis

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

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• Khalid Enan,

  Roles Formal analysis

  Affiliation Ministry of Higher Education and Scientific Research, Khartoum, Sudan

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• Jalal Nourlil,

  Roles Formal analysis

  Affiliation Pasteur Institute of Morocco, Casablanca, Morocco

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• Eva Krause,

  Roles Formal analysis

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

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• Lars Schaade,

  Roles Conceptualization

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

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• Janine Michel,

  Roles Formal analysis

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

  https://orcid.org/0000-0001-6227-3125

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• Andreas Nitsche

  Roles Conceptualization, Writing – original draft, Writing – review & editing

  Affiliation Highly Pathogenic Viruses, Centre for Biological Threats and Special Pathogens, WHO Reference Laboratory for SARS-CoV-2 and WHO Collaborating Centre for Emerging Infections and Biological Threats, Robert Koch Institute, Berlin, Germany

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