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Open Access
Peer-reviewed
Research Article
Protein prediction for trait mapping in diverse populations
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Ryan Schubert,
Roles Conceptualization, Formal analysis, Methodology, Visualization, Writing – original draft, Writing – review & editing
Affiliations Department of Mathematics and Statistics, Loyola University Chicago, Chicago, IL, United States of America, Department of Biology, Loyola University Chicago, Chicago, IL, United States of America, Program in Bioinformatics, Loyola University Chicago, Chicago, IL, United States of America
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Elyse Geoffroy,
Roles Formal analysis, Writing – review & editing
Affiliation Program in Bioinformatics, Loyola University Chicago, Chicago, IL, United States of America
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Isabelle Gregga,
Roles Formal analysis, Writing – review & editing
Affiliation Department of Biology, Loyola University Chicago, Chicago, IL, United States of America
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Ashley J. Mulford,
Roles Formal analysis, Writing – review & editing
Affiliations Department of Biology, Loyola University Chicago, Chicago, IL, United States of America, Program in Bioinformatics, Loyola University Chicago, Chicago, IL, United States of America
⨯ - Francois Aguet,
- Kristin Ardlie,
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Robert Gerszten,
Roles Data curation, Resources
Affiliation Beth Israel Deaconess Medical Center, Boston, MA, United States of America
⨯ - Clary Clish,
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David Van Den Berg,
Roles Resources
Affiliation University of Southern California, Los Angeles, CA, United States of America
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Kent D. Taylor,
Roles Resources
Affiliation The Institute for Translational Genomics and Population Sciences, Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, United States of America
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Peter Durda,
Roles Resources
Affiliation Laboratory for Clinical Biochemistry Research, University of Vermont, Burlington, VT, United States of America
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W. Craig Johnson,
Roles Data curation
Affiliation Collaborative Health Studies Coordinating Center, University of Washington, Seattle, WA, United States of America
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Elaine Cornell,
Roles Resources
Affiliation Laboratory for Clinical Biochemistry Research, University of Vermont, Burlington, VT, United States of America
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Xiuqing Guo,
Roles Data curation, Resources
Affiliation The Institute for Translational Genomics and Population Sciences, Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, United States of America
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Yongmei Liu,
Roles Resources
Affiliation Department of Medicine, Duke University School of Medicine, Durham, NC, United States of America
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Russell Tracy,
Roles Resources
Affiliation Laboratory for Clinical Biochemistry Research, University of Vermont, Burlington, VT, United States of America
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Matthew Conomos,
Roles Data curation
Affiliation Department of Biostatistics, University of Washington, Seattle, WA, United States of America
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Tom Blackwell,
Roles Resources, Writing – review & editing
Affiliation Department of Biostatistics, University of Michigan, Ann Arbor, MI, United States of America
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George Papanicolaou,
Roles Resources
Affiliation Epidemiology Branch, National Heart, Lung and Blood Institute, Bethesda, MD, United States of America
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Tuuli Lappalainen,
Roles Resources, Writing – review & editing
Affiliation New York Genome Center and Department of Systems Biology, Columbia University, New York, NY United States of America
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Anna V. Mikhaylova,
Roles Resources, Writing – review & editing
Affiliation Department of Biostatistics, University of Washington, Seattle, WA, United States of America
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Timothy A. Thornton,
Roles Resources, Writing – review & editing
Affiliation Department of Biostatistics, University of Washington, Seattle, WA, United States of America
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Michael H. Cho,
Roles Resources, Writing – review & editing
Affiliation Channing Division of Network Medicine, Brigham and Women’s Hospital, Boston, MA, United States of America
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Christopher R. Gignoux,
Roles Resources, Writing – review & editing
Affiliation Division of Biomedical Informatics and Personalized Medicine, Department of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, United States of America
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Leslie Lange,
Roles Resources, Writing – review & editing
Affiliation Division of Biomedical Informatics and Personalized Medicine, Department of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, United States of America
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Ethan Lange,
Roles Resources, Writing – review & editing
Affiliation Division of Biomedical Informatics and Personalized Medicine, Department of Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, United States of America
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Stephen S. Rich,
Roles Funding acquisition, Methodology, Resources, Writing – review & editing
Affiliation Center for Public Health Genomics, University of Virginia, Charlottesville, VA, United States of America
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Jerome I. Rotter,
Roles Funding acquisition, Project administration, Resources, Writing – review & editing
Affiliation The Institute for Translational Genomics and Population Sciences, Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA, United States of America
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NHLBI TOPMed Consortium ,
¶Membership list can be found in the
⨯S8 Table . -
Ani Manichaikul,
Roles Methodology, Resources, Writing – review & editing
Affiliation Center for Public Health Genomics, University of Virginia, Charlottesville, VA, United States of America
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Hae Kyung Im,
Roles Methodology, Resources, Writing – review & editing
Affiliation Section of Genetic Medicine, The University of Chicago, Chicago, IL, United States of America
⨯ - [ ... ],
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Heather E. Wheeler
Roles Conceptualization, Formal analysis, Funding acquisition, Project administration, Resources, Visualization, Writing – original draft, Writing – review & editing
* E-mail: hwheeler1@luc.edu
Affiliations Department of Biology, Loyola University Chicago, Chicago, IL, United States of America, Program in Bioinformatics, Loyola University Chicago, Chicago, IL, United States of America
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Protein prediction for trait mapping in diverse populations
- Ryan Schubert,
- Elyse Geoffroy,
- Isabelle Gregga,
- Ashley J. Mulford,
- Francois Aguet,
- Kristin Ardlie,
- Robert Gerszten,
- Clary Clish,
- David Van Den Berg,
- Kent D. Taylor
- Published: February 24, 2022
- https://doi.org/10.1371/journal.pone.0264341
- See the preprint