In search of autophagy biomarkers in breast cancer: Receptor status and drug agnostic transcriptional changes during autophagy flux in cell lines

• Francesca Mascia,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Validation, Writing – original draft, Writing – review & editing

  Affiliation Laboratory of Applied Biochemistry, Division of Biotechnology Review and Research III, Office of Biotechnology Products, CDER, FDA, Silver Spring, Maryland, United States of America

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• Ilya Mazo,

  Roles Data curation, Formal analysis, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation HIVE Bioinformatics Group, Office of Biostatistics and Epidemiology, CBER, FDA, Silver Spring, Maryland, United States of America

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• Wei-Lun Alterovitz,

  Roles Data curation, Formal analysis, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

  Affiliation HIVE Bioinformatics Group, Office of Biostatistics and Epidemiology, CBER, FDA, Silver Spring, Maryland, United States of America

  https://orcid.org/0000-0001-7886-0762

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• Konstantinos Karagiannis,

  Roles Data curation, Formal analysis, Methodology, Project administration, Software, Supervision, Validation, Visualization, Writing – review & editing

  Affiliation HIVE Bioinformatics Group, Office of Biostatistics and Epidemiology, CBER, FDA, Silver Spring, Maryland, United States of America

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• Wells W. Wu,

  Roles Data curation, Formal analysis, Investigation, Methodology, Validation, Writing – review & editing

  Affiliation Facility for Biotechnology Resource CBER, FDA, Silver Spring, Maryland, United States of America

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• Rong-Fong Shen,

  Roles Methodology, Project administration, Supervision, Writing – review & editing

  Affiliation Facility for Biotechnology Resource CBER, FDA, Silver Spring, Maryland, United States of America

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• Julia A. Beaver,

  Roles Conceptualization, Writing – review & editing

  Affiliation Oncology Center of Excellence, FDA, Silver Spring, Maryland, United States of America

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• V. Ashutosh Rao

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: ashutosh.rao@fda.hhs.gov

  Affiliation Laboratory of Applied Biochemistry, Division of Biotechnology Review and Research III, Office of Biotechnology Products, CDER, FDA, Silver Spring, Maryland, United States of America

  https://orcid.org/0000-0001-6817-8049

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