Reconstructing SARS-CoV-2 infection dynamics through the phylogenetic inference of unsampled sources of infection

• Deshan Perera,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Writing – original draft, Writing – review & editing

  Affiliation Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada

  https://orcid.org/0000-0003-4654-0734

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• Ben Perks ,

  Contributed equally to this work with: Ben Perks, Michael Potemkin

  Roles Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization

  Affiliation Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada

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• Michael Potemkin ,

  Contributed equally to this work with: Ben Perks, Michael Potemkin

  Roles Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization

  Affiliation Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada

  https://orcid.org/0000-0003-1302-4602

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• Andy Liu,

  Roles Data curation, Visualization, Writing – review & editing

  Affiliation International Baccalaureate Diploma program, Sir Winston Churchill High School, Calgary, AB, Canada

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• Paul M. K. Gordon,

  Roles Conceptualization, Funding acquisition, Methodology, Resources, Software, Writing – review & editing

  Affiliation Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada

  https://orcid.org/0000-0003-2881-1713

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• M. John Gill,

  Roles Conceptualization, Funding acquisition, Investigation, Writing – original draft, Writing – review & editing

  Affiliations Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada, Department of Microbiology, Immunology, and Infectious Diseases, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada

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• Quan Long ,

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Software, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: quan.long@ucalgary.ca (QL); vanmarle@ucalgary.ca (GM)

  Affiliations Department of Biochemistry & Molecular Biology, Alberta Children’s Hospital Research Institute, University of Calgary, Calgary, AB, Canada, Department of Medical Genetics, and Mathematics & Statistics, Alberta Children’s Hospital Research Institute, O’Brien Institute for Public Health, University of Calgary, Calgary, AB, Canada

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• Guido van Marle

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: quan.long@ucalgary.ca (QL); vanmarle@ucalgary.ca (GM)

  Affiliation Department of Microbiology, Immunology, and Infectious Diseases, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada

  https://orcid.org/0000-0002-5148-6229

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