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Open Access
Peer-reviewed
Research Article
Reconstructing SARS-CoV-2 infection dynamics through the phylogenetic inference of unsampled sources of infection
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Deshan Perera,
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Writing – original draft, Writing – review & editing
Affiliation Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada
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Ben Perks ,
Contributed equally to this work with: Ben Perks, Michael Potemkin
Roles Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization
Affiliation Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada
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Michael Potemkin ,
Contributed equally to this work with: Ben Perks, Michael Potemkin
Roles Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization
Affiliation Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada
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Andy Liu,
Roles Data curation, Visualization, Writing – review & editing
Affiliation International Baccalaureate Diploma program, Sir Winston Churchill High School, Calgary, AB, Canada
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Paul M. K. Gordon,
Roles Conceptualization, Funding acquisition, Methodology, Resources, Software, Writing – review & editing
Affiliation Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada
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M. John Gill,
Roles Conceptualization, Funding acquisition, Investigation, Writing – original draft, Writing – review & editing
Affiliations Department of Medicine, Cumming School of Medicine, University of Calgary and Alberta Health Services, Calgary, AB, Canada, Department of Microbiology, Immunology, and Infectious Diseases, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
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Quan Long ,
Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Software, Supervision, Validation, Writing – original draft, Writing – review & editing
* E-mail: quan.long@ucalgary.ca (QL); vanmarle@ucalgary.ca (GM)
Affiliations Department of Biochemistry & Molecular Biology, Alberta Children’s Hospital Research Institute, University of Calgary, Calgary, AB, Canada, Department of Medical Genetics, and Mathematics & Statistics, Alberta Children’s Hospital Research Institute, O’Brien Institute for Public Health, University of Calgary, Calgary, AB, Canada
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Guido van Marle
Roles Conceptualization, Funding acquisition, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing
* E-mail: quan.long@ucalgary.ca (QL); vanmarle@ucalgary.ca (GM)
Affiliation Department of Microbiology, Immunology, and Infectious Diseases, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
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Reconstructing SARS-CoV-2 infection dynamics through the phylogenetic inference of unsampled sources of infection
- Deshan Perera,
- Ben Perks,
- Michael Potemkin,
- Andy Liu,
- Paul M. K. Gordon,
- M. John Gill,
- Quan Long,
- Guido van Marle
![PLOS](/resource/img/logo-plos.png)
- Published: December 15, 2021
- https://doi.org/10.1371/journal.pone.0261422