KRSA: An R package and R Shiny web application for an end-to-end upstream kinase analysis of kinome array data

• Erica A. K. DePasquale ,

  Contributed equally to this work with: Erica A. K. DePasquale, Khaled Alganem

  Roles Data curation, Formal analysis, Methodology, Software, Visualization, Writing – original draft

  Affiliations Division of Hematology, Brigham and Women’s Hospital, Boston, Massachusetts, United States of America, Harvard Medical School, Boston, Massachusetts, United States of America, Broad Institute of MIT and Harvard, Boston, Massachusetts, United States of America

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• Khaled Alganem ,

  Contributed equally to this work with: Erica A. K. DePasquale, Khaled Alganem

  Roles Formal analysis, Software, Visualization, Writing – review & editing

  * E-mail: khaled.alganem@rockets.utoledo.edu

  Affiliation Department of Neurosciences, University of Toledo College of Medicine, Toledo, Ohio, United States of America

  https://orcid.org/0000-0002-7368-5763

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• Eduard Bentea,

  Roles Data curation, Formal analysis, Methodology, Visualization, Writing – original draft

  Affiliation Neuro-Aging & Viro-Immunotherapy, Center for Neurosciences, Vrije Universiteit Brussel, Brussels, Belgium

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• Nawshaba Nawreen,

  Roles Data curation

  Affiliation Department of Neuroscience, University of Cincinnati, Cincinnati, Ohio, United States of America

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• Jennifer L. McGuire,

  Roles Conceptualization, Data curation, Investigation, Methodology, Project administration, Resources

  Affiliation Department of Neurosurgery, University of Cincinnati, Cincinnati, Ohio, United States of America

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• Tushar Tomar,

  Roles Data curation

  Affiliation PamGene International B.V., s’-Hertogenbosch, The Netherlands

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• Faris Naji,

  Roles Data curation, Methodology

  Affiliation Tercen Data Analytics Ltd, Co Waterford, Ireland

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• Riet Hilhorst,

  Roles Data curation, Methodology

  Affiliation PamGene International B.V., s’-Hertogenbosch, The Netherlands

  https://orcid.org/0000-0002-8261-1299

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• Jaroslaw Meller,

  Roles Conceptualization, Methodology, Supervision

  Affiliations Division of Biomedical Informatics, Cincinnati Children’s Hospital Medical Center, Cincinnati, Ohio, United States of America, Department of Cancer Biology, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America, Department of Environmental Health, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America, Department of Electrical Engineering and Computing Systems, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America, Department of Informatics, Nicolaus Copernicus University, Torun, Poland

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• Robert E. McCullumsmith

  Roles Conceptualization, Funding acquisition, Project administration, Supervision, Writing – review & editing

  Affiliations Department of Neurosciences, University of Toledo College of Medicine, Toledo, Ohio, United States of America, Neurosciences institute, ProMedica, Toledo, Ohio, United States of America

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