Detection of structural variations in densely-labelled optical DNA barcodes: A hidden Markov model approach

• Albertas Dvirnas ,

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft

  * E-mail: albertas.dvirnas@thep.lu.se

  Affiliation Department of Astronomy and Theoretical Physics, Lund University, Lund, Sweden

  https://orcid.org/0000-0002-1393-3024

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• Callum Stewart,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software

  Current address: Department of Biostatistics and Health Informatics, Institute of Psychiatry, Psychology and Neuroscience, King’s College London, London, United Kingdom

  Affiliation Department of Astronomy and Theoretical Physics, Lund University, Lund, Sweden

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• Vilhelm Müller,

  Roles Data curation, Investigation, Writing – review & editing

  Affiliation Division of Chemical Biology, Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden

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• Santosh Kumar Bikkarolla,

  Roles Data curation, Investigation, Writing – review & editing

  Current address: School of Engineering, Engineering Research Institute, Newtownabbey, United Kingdom

  Affiliation Division of Chemical Biology, Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden

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• Karolin Frykholm,

  Roles Data curation, Writing – review & editing

  Affiliation Division of Chemical Biology, Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden

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• Linus Sandegren,

  Roles Conceptualization, Funding acquisition, Resources, Writing – review & editing

  Affiliation Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden

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• Erik Kristiansson,

  Roles Conceptualization, Funding acquisition, Writing – review & editing

  Affiliation Department of Mathematical Sciences, Chalmers University of Technology and the University of Gothenburg, Gothenburg, Sweden

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• Fredrik Westerlund,

  Roles Conceptualization, Funding acquisition, Supervision, Writing – review & editing

  Affiliation Division of Chemical Biology, Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden

  https://orcid.org/0000-0002-4767-4868

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• Tobias Ambjörnsson

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Supervision, Writing – original draft

  Affiliation Department of Astronomy and Theoretical Physics, Lund University, Lund, Sweden

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