Who infects whom?—Reconstructing infection chains of Mycobacterium avium ssp. paratuberculosis in an endemically infected dairy herd by use of genomic data

• Annette Nigsch ,

  Roles Conceptualization, Formal analysis, Methodology, Writing – original draft

  * E-mail: annette.nigsch@wur.nl

  Affiliation Department of Animal Sciences, Wageningen University, Wageningen, The Netherlands

  https://orcid.org/0000-0002-6864-7447

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• Suelee Robbe-Austerman,

  Roles Resources

  Affiliation USDA APHIS National Veterinary Services Laboratories, Ames, Iowa, United States of America

  https://orcid.org/0000-0002-3794-3040

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• Tod P. Stuber,

  Roles Formal analysis, Software

  Affiliation USDA APHIS National Veterinary Services Laboratories, Ames, Iowa, United States of America

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• Paulina D. Pavinski Bitar,

  Roles Investigation

  Affiliation Department of Population Medicine and Diagnostic Sciences, College of Veterinary Medicine, Cornell University, Ithaca, NY, United States of America

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• Yrjö T. Gröhn,

  Roles Funding acquisition, Writing – review & editing

  Affiliation Department of Population Medicine and Diagnostic Sciences, College of Veterinary Medicine, Cornell University, Ithaca, NY, United States of America

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• Ynte H. Schukken

  Roles Conceptualization, Supervision, Writing – original draft, Writing – review & editing

  Affiliations Department of Animal Sciences, Wageningen University, Wageningen, The Netherlands, Royal GD, Deventer, The Netherlands

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