Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals

• Harsha Doddapaneni ,

  Roles Conceptualization, Methodology, Writing – original draft, Writing – review & editing

  * E-mail: doddapan@bcm.edu (HD); agibbs@bcm.edu (RAG)

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

  https://orcid.org/0000-0002-2433-633X

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• Sara Javornik Cregeen,

  Roles Formal analysis, Methodology, Writing – original draft, Writing – review & editing

  Affiliations Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America

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• Richard Sucgang,

  Roles Formal analysis, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America

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• Qingchang Meng,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Xiang Qin,

  Roles Formal analysis, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Vasanthi Avadhanula,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America

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• Hsu Chao,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Vipin Menon,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Erin Nicholson,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliations Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America, Pediatrics, Baylor College of Medicine, Houston, Texas, United States of America

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• David Henke,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America

  https://orcid.org/0000-0003-2911-2834

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• Felipe-Andres Piedra,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America

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• Anubama Rajan,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America

  https://orcid.org/0000-0003-4773-4362

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• Zeineen Momin,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Kavya Kottapalli,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Kristi L. Hoffman,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliations Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America

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• Fritz J. Sedlazeck,

  Roles Formal analysis, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Ginger Metcalf,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Pedro A. Piedra,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliations Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America, Pediatrics, Baylor College of Medicine, Houston, Texas, United States of America

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• Donna M. Muzny,

  Roles Methodology, Writing – original draft, Writing – review & editing

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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• Joseph F. Petrosino,

  Roles Methodology, Project administration, Writing – original draft, Writing – review & editing

  Affiliations Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America

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•  [ ... ],
• Richard A. Gibbs

  Roles Conceptualization, Methodology, Writing – original draft, Writing – review & editing

  * E-mail: doddapan@bcm.edu (HD); agibbs@bcm.edu (RAG)

  Affiliation Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, United States of America

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