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Open Access
Peer-reviewed
Research Article
Missing value imputation in proximity extension assay-based targeted proteomics data
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Michael Lenz ,
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft
* E-mail: michael.l.lenz@gmail.com
Affiliations Institute of Organismic and Molecular Evolution, Johannes Gutenberg University Mainz, Mainz, Germany, Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Andreas Schulz,
Roles Investigation, Methodology, Writing – review & editing
Affiliation Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Thomas Koeck,
Roles Data curation, Investigation, Writing – review & editing
Affiliations Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany, German Center for Cardiovascular Research (DZHK), Partner Site Rhine Main, Mainz, Germany
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Steffen Rapp,
Roles Investigation, Writing – review & editing
Affiliations Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany, German Center for Cardiovascular Research (DZHK), Partner Site Rhine Main, Mainz, Germany
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Markus Nagler,
Roles Investigation, Writing – review & editing
Affiliation Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Madeleine Sauer,
Roles Investigation, Writing – review & editing
Affiliation Disease Genomics, Bayer AG, Wuppertal, Germany
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Lisa Eggebrecht,
Roles Investigation, Writing – review & editing
Affiliations Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany, Center for Thrombosis and Hemostasis, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Vincent Ten Cate,
Roles Investigation, Writing – review & editing
Affiliations Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany, Center for Thrombosis and Hemostasis, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Marina Panova-Noeva,
Roles Investigation, Writing – review & editing
Affiliations Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany, German Center for Cardiovascular Research (DZHK), Partner Site Rhine Main, Mainz, Germany, Center for Thrombosis and Hemostasis, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Jürgen H. Prochaska,
Roles Investigation, Writing – review & editing
Affiliations Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany, German Center for Cardiovascular Research (DZHK), Partner Site Rhine Main, Mainz, Germany, Center for Thrombosis and Hemostasis, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Karl J. Lackner,
Roles Investigation, Resources, Writing – review & editing
Affiliation Institute of Clinical Chemistry and Laboratory Medicine, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Thomas Münzel,
Roles Funding acquisition, Resources, Writing – review & editing
Affiliations German Center for Cardiovascular Research (DZHK), Partner Site Rhine Main, Mainz, Germany, Center for Cardiology, Cardiology I, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Kirsten Leineweber,
Roles Conceptualization, Investigation, Writing – review & editing
Affiliation Disease Genomics, Bayer AG, Wuppertal, Germany
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Philipp S. Wild ,
Roles Conceptualization, Funding acquisition, Investigation, Project administration, Resources, Supervision, Writing – original draft
¶‡ These authors share last authorship on this work.
Affiliations Preventive Cardiology and Preventive Medicine–Center for Cardiology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany, German Center for Cardiovascular Research (DZHK), Partner Site Rhine Main, Mainz, Germany, Center for Thrombosis and Hemostasis, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany
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Miguel A. Andrade-Navarro
Roles Conceptualization, Investigation, Methodology, Project administration, Supervision, Writing – original draft
¶‡ These authors share last authorship on this work.
Affiliation Institute of Organismic and Molecular Evolution, Johannes Gutenberg University Mainz, Mainz, Germany
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Missing value imputation in proximity extension assay-based targeted proteomics data
- Michael Lenz,
- Andreas Schulz,
- Thomas Koeck,
- Steffen Rapp,
- Markus Nagler,
- Madeleine Sauer,
- Lisa Eggebrecht,
- Vincent Ten Cate,
- Marina Panova-Noeva,
- Jürgen H. Prochaska
- Published: December 14, 2020
- https://doi.org/10.1371/journal.pone.0243487