dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data

• Jianhong Ou ,

  Contributed equally to this work with: Jianhong Ou, Haibo Liu

  Roles Investigation, Methodology, Software, Validation, Visualization, Writing – review & editing

  Affiliations Department of Molecular, Cell, and Cancer Biology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America, Regeneration NEXT, Duke University School of Medicine, Duke University, Durham, North Carolina, United States of America

  https://orcid.org/0000-0002-8652-2488

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• Haibo Liu ,

  Contributed equally to this work with: Jianhong Ou, Haibo Liu

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Molecular, Cell, and Cancer Biology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America

  https://orcid.org/0000-0002-4213-2883

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• Niraj K. Nirala,

  Roles Validation, Writing – review & editing

  Affiliation Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America

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• Alexey Stukalov,

  Roles Methodology, Software, Writing – review & editing

  Affiliation Institute of Virology, Technical University of Munich, Munich, Germany

  https://orcid.org/0000-0002-4981-8124

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• Usha Acharya,

  Roles Data curation, Validation, Writing – review & editing

  Current address: Cancer and Developmental Biology Laboratory, National Cancer Institute, Frederick, Maryland, United States of America

  Affiliation Department of Molecular, Cell, and Cancer Biology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America

  https://orcid.org/0000-0002-4433-4892

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• Michael R. Green,

  Roles Resources, Validation, Writing – review & editing

  Affiliation Department of Molecular, Cell, and Cancer Biology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America

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• Lihua Julie Zhu

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: Julie.Zhu@umassmed.edu

  Affiliations Department of Molecular, Cell, and Cancer Biology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America, Program in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America, Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America

  https://orcid.org/0000-0001-7416-0590

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