Using case-level context to classify cancer pathology reports

Shang Gao; Mohammed Alawad; Noah Schaefferkoetter; Lynne Penberthy; Xiao-Cheng Wu; Eric B. Durbin; Linda Coyle; Arvind Ramanathan; Georgia Tourassi

doi:10.1371/journal.pone.0232840

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Open Access

Peer-reviewed

Research Article

Using case-level context to classify cancer pathology reports

Shang Gao ,

Roles Conceptualization, Formal analysis, Investigation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

* E-mail: gaos@ornl.gov (SG); tourassig@ornl.gov (GT)

Affiliation Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States of America

http://orcid.org/0000-0003-1803-1457

⨯
Mohammed Alawad,

Roles Investigation, Methodology, Writing – review & editing

Affiliation Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States of America

http://orcid.org/0000-0002-7491-0440

⨯
Noah Schaefferkoetter,

Roles Data curation, Software

Affiliation Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States of America
⨯
Lynne Penberthy,

Roles Data curation, Resources

Affiliation Division of Cancer Control and Population Sciences, National Cancer Institute, Bethesda, MD, United States of America
⨯
Xiao-Cheng Wu,

Roles Data curation

Affiliation Louisiana Tumor Registry, Louisiana State University Health Sciences Center School of Public Health, New Orleans, LA, United States of America
⨯
Eric B. Durbin,

Roles Data curation

Affiliation Kentucky Cancer Registry, University of Kentucky, Lexington, KY, United States of America

http://orcid.org/0000-0002-5600-7645

⨯
Linda Coyle,

Roles Data curation

Affiliation Information Management Services Inc, Calverton, MD, United States of America
⨯
Arvind Ramanathan,

Roles Conceptualization, Methodology, Writing – review & editing

Affiliation Data Science and Learning Division, Argonne National Laboratory, Lemont, IL, United States of America

http://orcid.org/0000-0002-1622-5488

⨯
Georgia Tourassi

Roles Conceptualization, Funding acquisition, Supervision, Writing – review & editing

* E-mail: gaos@ornl.gov (SG); tourassig@ornl.gov (GT)

Affiliation Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States of America
⨯

Using case-level context to classify cancer pathology reports

Shang Gao,
Mohammed Alawad,
Noah Schaefferkoetter,
Lynne Penberthy,
Xiao-Cheng Wu,
Eric B. Durbin,
Linda Coyle,
Arvind Ramanathan,
Georgia Tourassi

Published: May 12, 2020
https://doi.org/10.1371/journal.pone.0232840

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Cancers and neoplasms
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Malignant tumors
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