Neonatal microbiota development and the effect of early life antibiotics are determined by two distinct settler types

• Anat Eck ,

  Contributed equally to this work with: Anat Eck, Nicole B. M. M. Rutten

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Medical Microbiology and Infection Control, Amsterdam UMC, VU University Amsterdam, Amsterdam, The Netherlands

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• Nicole B. M. M. Rutten ,

  Contributed equally to this work with: Anat Eck, Nicole B. M. M. Rutten

  Roles Data curation, Formal analysis, Investigation, Methodology, Project administration, Writing – original draft, Writing – review & editing

  Affiliation Department of Pediatrics, St Antonius Hospital, Nieuwegein, The Netherlands

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• Maartje M. J. Singendonk,

  Roles Data curation, Formal analysis, Investigation, Validation, Writing – review & editing

  Affiliation Department of Pediatric Gastroenterology and Nutrition, Emma Children’s Hospital, Amsterdam UMC, University of Amsterdam, Amsterdam, The Netherlands

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• Ger T. Rijkers,

  Roles Conceptualization, Funding acquisition, Project administration, Supervision, Writing – review & editing

  Affiliation Department of Sciences, University College Roosevelt Academy, Middelburg, The Netherlands

  http://orcid.org/0000-0001-6948-6123

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• Paul H. M. Savelkoul,

  Roles Project administration, Supervision, Writing – review & editing

  Affiliations Department of Medical Microbiology and Infection Control, Amsterdam UMC, VU University Amsterdam, Amsterdam, The Netherlands, Department of Medical Microbiology, NUTRIM School of Nutrition and Translational Research in Metabolism, Maastricht University Medical Centre, Maastricht, The Netherlands

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• Clemens B. Meijssen,

  Roles Data curation, Resources, Writing – review & editing

  Affiliation Department of Pediatrics, Meander Medical Centre, Amersfoort, The Netherlands

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• Clarissa E. Crijns,

  Roles Data curation, Resources, Writing – review & editing

  Affiliation Department of Pediatrics, Tergooi Hospital, Blaricum, The Netherlands

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• Johanna H. Oudshoorn,

  Roles Data curation, Resources, Writing – review & editing

  Affiliation Department of Pediatrics, Gelre Hospitals, Apeldoorn, The Netherlands

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• Andries E. Budding,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Medical Microbiology and Infection Control, Amsterdam UMC, VU University Amsterdam, Amsterdam, The Netherlands

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• Arine M. Vlieger

  Roles Conceptualization, Funding acquisition, Project administration, Resources, Supervision, Writing – review & editing

  * E-mail: a.vlieger@antoniusziekenhuis.nl

  Affiliation Department of Pediatrics, St Antonius Hospital, Nieuwegein, The Netherlands

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