Identification of factors associated with duplicate rate in ChIP-seq data

Shulan Tian; Shuxia Peng; Michael Kalmbach; Krutika S. Gaonkar; Aditya Bhagwate; Wei Ding; Jeanette Eckel-Passow; Huihuang Yan; Susan L. Slager

doi:10.1371/journal.pone.0214723

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Open Access

Peer-reviewed

Research Article

Identification of factors associated with duplicate rate in ChIP-seq data

Shulan Tian,

Roles Conceptualization, Formal analysis, Writing – original draft

Affiliation Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, United States of America
⨯
Shuxia Peng,

Roles Formal analysis

Current address: University of Michigan School of Public Health II, Ann Arbor, Michigan, United States of America

Affiliation Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, United States of America
⨯
Michael Kalmbach,

Roles Resources

Affiliation Division of Research and Education Support Systems, Department of Information Technology, Mayo Clinic, Rochester, Minnesota, United States of America
⨯
Krutika S. Gaonkar,

Roles Formal analysis

Affiliation Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, United States of America
⨯
Aditya Bhagwate,

Roles Formal analysis

Affiliation Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, United States of America
⨯
Wei Ding,

Roles Writing – review & editing

Affiliation Division of Hematology, Mayo Clinic, Rochester, Minnesota, United States of America
⨯
Jeanette Eckel-Passow,

Roles Methodology, Writing – review & editing

Affiliation Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, United States of America
⨯
Huihuang Yan ,

Roles Conceptualization, Formal analysis, Writing – original draft

* E-mail: yan.huihuang@mayo.edu (HY); Slager.Susan@mayo.edu (SLS)

Affiliation Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, United States of America

http://orcid.org/0000-0003-0756-2922

⨯
Susan L. Slager

Roles Conceptualization, Formal analysis, Funding acquisition, Writing – original draft

* E-mail: yan.huihuang@mayo.edu (HY); Slager.Susan@mayo.edu (SLS)

Affiliation Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, United States of America
⨯

Identification of factors associated with duplicate rate in ChIP-seq data

Shulan Tian,
Shuxia Peng,
Michael Kalmbach,
Krutika S. Gaonkar,
Aditya Bhagwate,
Wei Ding,
Jeanette Eckel-Passow,
Huihuang Yan,
Susan L. Slager

Published: April 3, 2019
https://doi.org/10.1371/journal.pone.0214723

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