16S rRNA gene profiling and genome reconstruction reveal community metabolic interactions and prebiotic potential of medicinal herbs used in neurodegenerative disease and as nootropics

• Christine Tara Peterson ,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: chpeterson@ucsd.edu

  Affiliation UC San Diego, School of Medicine, Center of Excellence for Research and Training in Integrative Health, Department of Family Medicine and Public Health, La Jolla, California, United States of America

  http://orcid.org/0000-0002-6951-5753

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• Vandana Sharma,

  Roles Data curation, Formal analysis, Methodology, Software, Visualization

  Affiliation Sanford Burnham Prebys Medical Discovery Institute, Bioinformatics and Structural Biology Program, La Jolla, California, United States of America

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• Stanislav N. Iablokov,

  Roles Software, Visualization, Writing – review & editing

  Affiliations Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia, P.G. Demidov Yaroslavl State University, Yaroslavl, Russia

  http://orcid.org/0000-0003-1168-720X

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• Levent Albayrak,

  Roles Methodology, Software, Visualization, Writing – review & editing

  Affiliation Department of Pharmacology and Toxicology, Sealy Center for Structural Biology, University of Texas Medical Branch, Galveston, Texas, United States of America

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• Kamil Khanipov,

  Roles Software, Visualization, Writing – review & editing

  Affiliation Department of Pharmacology and Toxicology, Sealy Center for Structural Biology, University of Texas Medical Branch, Galveston, Texas, United States of America

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• Sasha Uchitel,

  Roles Data curation, Investigation, Methodology, Project administration, Writing – review & editing

  Affiliation Washington University, Department of Biology, St. Louis, Missouri, United States of America

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• Deepak Chopra,

  Roles Supervision, Validation, Writing – review & editing

  Affiliations UC San Diego, School of Medicine, Center of Excellence for Research and Training in Integrative Health, Department of Family Medicine and Public Health, La Jolla, California, United States of America, Chopra Foundation, Department of Ayurveda and Yoga Research, Carlsbad, California, United States of America

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• Paul J. Mills,

  Roles Formal analysis, Resources, Supervision, Validation, Writing – review & editing

  Affiliation UC San Diego, School of Medicine, Center of Excellence for Research and Training in Integrative Health, Department of Family Medicine and Public Health, La Jolla, California, United States of America

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• Yuriy Fofanov,

  Roles Formal analysis, Software, Writing – review & editing

  Affiliation Department of Pharmacology and Toxicology, Sealy Center for Structural Biology, University of Texas Medical Branch, Galveston, Texas, United States of America

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• Dmitry A. Rodionov,

  Roles Formal analysis, Software, Writing – review & editing

  Affiliations Sanford Burnham Prebys Medical Discovery Institute, Bioinformatics and Structural Biology Program, La Jolla, California, United States of America, Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia

  http://orcid.org/0000-0002-0939-390X

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• Scott N. Peterson

  Roles Data curation, Formal analysis, Investigation, Resources, Writing – review & editing

  Affiliations Sanford Burnham Prebys Medical Discovery Institute, Bioinformatics and Structural Biology Program, La Jolla, California, United States of America, Sanford Burnham Prebys Medical Discovery Institute, Tumor Microenvironment and Cancer Immunology Program, La Jolla, California, United States of America

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