HIV-1 subtype diversity, transmission networks and transmitted drug resistance amongst acute and early infected MSM populations from Coastal Kenya

• Amin S. Hassan ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Software, Writing – original draft, Writing – review & editing

  * E-mail: ahassan@kemri-wellcome.org

  Affiliations KEMRI/Wellcome Trust Research Programme, Kilifi, Kenya, Lund University, Lund, Sweden

  http://orcid.org/0000-0001-5296-4264

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• Joakim Esbjörnsson,

  Roles Conceptualization, Funding acquisition, Methodology, Supervision, Writing – original draft, Writing – review & editing

  Affiliations Lund University, Lund, Sweden, Oxford University, Oxford, United Kingdom

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• Elizabeth Wahome,

  Roles Data curation, Writing – review & editing

  Affiliation KEMRI/Wellcome Trust Research Programme, Kilifi, Kenya

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• Alexander Thiong’o,

  Roles Data curation, Writing – review & editing

  Affiliation KEMRI/Wellcome Trust Research Programme, Kilifi, Kenya

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• George N. Makau,

  Roles Writing – review & editing

  Affiliations KEMRI/Wellcome Trust Research Programme, Kilifi, Kenya, Lund University, Lund, Sweden

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• Mathew A. Price,

  Roles Writing – review & editing

  Affiliations International AIDS Vaccine Initiative, New York, New York, United States of America, Department of Epidemiology and Biostatistics, University of California at San Francisco, San Francisco, California, United States of America

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• Eduard J. Sanders

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Supervision, Writing – original draft, Writing – review & editing

  Affiliations KEMRI/Wellcome Trust Research Programme, Kilifi, Kenya, Oxford University, Oxford, United Kingdom

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