Identification of candidate genes for gelatinization temperature, gel consistency and pericarp color by GWAS in rice based on SLAF-sequencing

Xinghai Yang; Xiuzhong Xia; Yu Zeng; Baoxuan Nong; Zongqiong Zhang; Yanyan Wu; Faqian Xiong; Yuexiong Zhang; Haifu Liang; Guofu Deng; Danting Li

doi:10.1371/journal.pone.0196690

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Open Access

Peer-reviewed

Research Article

Identification of candidate genes for gelatinization temperature, gel consistency and pericarp color by GWAS in rice based on SLAF-sequencing

Xinghai Yang ,

Contributed equally to this work with: Xinghai Yang, Xiuzhong Xia

Roles Conceptualization, Validation, Writing – original draft, Writing – review & editing

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China

http://orcid.org/0000-0002-3476-2578

⨯
Xiuzhong Xia ,

Contributed equally to this work with: Xinghai Yang, Xiuzhong Xia

Roles Investigation

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Yu Zeng,

Roles Investigation

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Baoxuan Nong,

Roles Investigation

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Zongqiong Zhang,

Roles Investigation

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Yanyan Wu,

Roles Formal analysis

Affiliation Biotechnology Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Faqian Xiong,

Roles Formal analysis, Software

Affiliation Cash Crops Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Yuexiong Zhang,

Roles Data curation, Software

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Haifu Liang,

Roles Formal analysis

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Guofu Deng,

Roles Formal analysis

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China
⨯
Danting Li

Roles Conceptualization, Writing – review & editing

* E-mail: ricegl@163.com

Affiliation Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, Guangxi, China

http://orcid.org/0000-0002-3510-8236

⨯

Identification of candidate genes for gelatinization temperature, gel consistency and pericarp color by GWAS in rice based on SLAF-sequencing

Xinghai Yang,
Xiuzhong Xia,
Yu Zeng,
Baoxuan Nong,
Zongqiong Zhang,
Yanyan Wu,
Faqian Xiong,
Yuexiong Zhang,
Haifu Liang,
Guofu Deng

Published: May 10, 2018
https://doi.org/10.1371/journal.pone.0196690
See the preprint

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Rice
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Genome-wide association studies
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Transcription factors
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Quantitative trait loci
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Single nucleotide polymorphisms
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Pericarp
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Biosynthesis
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